Pseudomonas avellanae strain MAFF 212061

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas avellanae strain MAFF 212061 is characterized by its single replicon structure, making it genetically distinct with a streamlined genomic organization. This strain is notably associated with Corylus avellana, commonly known as the hazelnut tree, where it plays a significant role in the health of this host species. One of the critical health effects linked to Pseudomonas avellanae strain MAFF 212061 is its association with decline disease in hazelnut trees. This decline disease can lead to significant agricultural losses, affecting the vitality and productivity of hazelnut crops. The bacterium's pathogenicity is a concern for growers, as it can compromise the health of the plants and disrupt yield. The accession number for this strain is NKQU00000000.1, which can be referenced for further genomic and taxonomic studies. Understanding the specific interactions between Pseudomonas avellanae strain MAFF 212061 and its host is crucial for developing effective management strategies to mitigate the impact of the decline disease on hazelnut production. This strain exemplifies the complex dynamics between plant-associated bacteria and their hosts, highlighting the importance of microbial research in agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas avellanae
Strainstrain MAFF 212061

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas avellanae strain MAFF 212061
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Corylus avellana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas avellanae strain MAFF 212061

Gene Summary

Adenine Count

1414505 bp

Thymine Count

1419800 bp

Guanine Count

2003129 bp

Cytosine Count

2001236 bp

Genome Length

6999176 bp

Protein-coding Genes

5218 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cold shock domain protein cspdCFN58_24120Not AvailableNegative4676191 - 467646910019.8
atp-dependent clp protease adaptor clpsCFN58_24125Not AvailablePositive4676690 - 467705213485.0
atp-dependent clp protease atp-binding subunit clpaCFN58_24130Not AvailablePositive4677083 - 467935683610.0
translation initiation factor if-1CFN58_24135Not AvailableNegative4679472 - 46796908303.06
arginyltransferaseCFN58_24140Not AvailableNegative4679792 - 468049927827.2
leucyl/phenylalanyl-trna--protein transferaseCFN58_24145Not AvailableNegative4680560 - 468124926247.1
outer-membrane lipoprotein carrier protein lolaCFN58_24160Not AvailablePositive4684207 - 468483022818.5
replication-associated recombination protein aCFN58_24165Not AvailablePositive4684848 - 468617048867.3
hypothetical proteinCFN58_24180Not AvailablePositive4688089 - 46883298720.46
uroporphyrinogen-iii c-methyltransferaseCFN58_24185Not AvailablePositive4688330 - 468972449934.7

Displaying genes 3601 – 3610 of 5329 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Decline diseaseCausesPMC9104263

Displaying health effects 1 – 1 of 1 in total