Pseudomonas avellanae strain MAFF 212061

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas avellanae strain MAFF 212061 is characterized by its single replicon structure, making it genetically distinct with a streamlined genomic organization. This strain is notably associated with Corylus avellana, commonly known as the hazelnut tree, where it plays a significant role in the health of this host species. One of the critical health effects linked to Pseudomonas avellanae strain MAFF 212061 is its association with decline disease in hazelnut trees. This decline disease can lead to significant agricultural losses, affecting the vitality and productivity of hazelnut crops. The bacterium's pathogenicity is a concern for growers, as it can compromise the health of the plants and disrupt yield. The accession number for this strain is NKQU00000000.1, which can be referenced for further genomic and taxonomic studies. Understanding the specific interactions between Pseudomonas avellanae strain MAFF 212061 and its host is crucial for developing effective management strategies to mitigate the impact of the decline disease on hazelnut production. This strain exemplifies the complex dynamics between plant-associated bacteria and their hosts, highlighting the importance of microbial research in agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas avellanae
Strainstrain MAFF 212061

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas avellanae strain MAFF 212061
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Corylus avellana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas avellanae strain MAFF 212061

Gene Summary

Adenine Count

1414505 bp

Thymine Count

1419800 bp

Guanine Count

2003129 bp

Cytosine Count

2001236 bp

Genome Length

6999176 bp

Protein-coding Genes

5218 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iii secretion proteinCFN58_11265Not AvailableNegative1946932 - 19471568011.32
type iii secretion proteinCFN58_11270Not AvailableNegative1947242 - 194782321276.2
escj/yscj/hrcj family type iii secretion inner membrane ring proteinCFN58_11280Not AvailableNegative1948384 - 194919029171.5
esci/ysci/hrpb family type iii secretion system inner rod proteinCFN58_11285Not AvailableNegative1949199 - 194957313192.7
type iii secretion protein hrpzCFN58_11290Not AvailableNegative1949601 - 195055131035.6
type iii secretion protein hrpzCFN58_11295Not AvailableNegative1950739 - 195107811168.0
hypothetical proteinCFN58_11300Not AvailableNegative1951134 - 195147511347.4
sigma-54-dependent fis family transcriptional regulatorCFN58_11305Not AvailableNegative1951569 - 195247733207.3
aaa family atpaseCFN58_11310Not AvailableNegative1952523 - 195346734630.1
lytic transglycosylaseCFN58_11315Not AvailableNegative1954545 - 195603254171.6

Displaying genes 1571 – 1580 of 5329 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Decline diseaseCausesPMC9104263

Displaying health effects 1 – 1 of 1 in total