Pseudomonas avellanae strain MAFF 212061

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas avellanae strain MAFF 212061 is characterized by its single replicon structure, making it genetically distinct with a streamlined genomic organization. This strain is notably associated with Corylus avellana, commonly known as the hazelnut tree, where it plays a significant role in the health of this host species. One of the critical health effects linked to Pseudomonas avellanae strain MAFF 212061 is its association with decline disease in hazelnut trees. This decline disease can lead to significant agricultural losses, affecting the vitality and productivity of hazelnut crops. The bacterium's pathogenicity is a concern for growers, as it can compromise the health of the plants and disrupt yield. The accession number for this strain is NKQU00000000.1, which can be referenced for further genomic and taxonomic studies. Understanding the specific interactions between Pseudomonas avellanae strain MAFF 212061 and its host is crucial for developing effective management strategies to mitigate the impact of the decline disease on hazelnut production. This strain exemplifies the complex dynamics between plant-associated bacteria and their hosts, highlighting the importance of microbial research in agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas avellanae
Strainstrain MAFF 212061

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas avellanae strain MAFF 212061
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Corylus avellana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas avellanae strain MAFF 212061

Gene Summary

Adenine Count

1414505 bp

Thymine Count

1419800 bp

Guanine Count

2003129 bp

Cytosine Count

2001236 bp

Genome Length

6999176 bp

Protein-coding Genes

5218 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flagellar hook-length control protein flikCFN58_11195Not AvailablePositive1938072 - 193864120178.0
type iii secretion system proteinCFN58_11200Not AvailablePositive1938638 - 193935426031.2
escr/yscr/hrcr family type iii secretion system export apparatus proteinCFN58_11210Not AvailablePositive1939750 - 194040324131.5
escs/yscs/hrcs family type iii secretion system export apparatus proteinCFN58_11215Not AvailablePositive1940411 - 19406779424.15
esct/ysct/hrct family type iii secretion system export apparatus proteinCFN58_11220Not AvailablePositive1940678 - 194147228328.9
escu/yscu/hrcu family type iii secretion system export apparatus switch proteinCFN58_11225Not AvailablePositive1941469 - 194254839866.4
hypothetical proteinCFN58_11235Not AvailableNegative1942919 - 19430896443.82
type iii secretion protein hrpvCFN58_11240Not AvailableNegative1943283 - 194364213886.4
type iii secretion proteinCFN58_11245Not AvailableNegative1943645 - 19438487720.35
type iii secretion proteinCFN58_11260Not AvailableNegative1946730 - 19469457713.05

Displaying genes 1561 – 1570 of 5329 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Decline diseaseCausesPMC9104263

Displaying health effects 1 – 1 of 1 in total