Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | subsp. bolletii strain 1189 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
884014 bp
Thymine Count
884796 bp
Guanine Count
1583393 bp
Cytosine Count
1588284 bp
Genome Length
4940537 bp
Protein-coding Genes
4665 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase ii | CFA71_00415 | Not Available | Negative | 85536 - 86123 | 20831.4 |
| l-asparaginase | CFA71_00420 | Not Available | Positive | 86174 - 87151 | 32503.0 |
| dna polymerase iv | CFA71_00425 | Not Available | Negative | 87104 - 88483 | 48677.9 |
| sam-dependent methyltransferase | CFA71_00430 | Not Available | Positive | 88639 - 89166 | 19226.8 |
| isoleucine--trna ligase | CFA71_00435 | Not Available | Negative | 89280 - 92456 | 119702.0 |
| mfs transporter | CFA71_00440 | Not Available | Negative | 92660 - 93919 | 42637.0 |
| lysr family transcriptional regulator | CFA71_00445 | Not Available | Positive | 94011 - 94883 | 31808.4 |
| hypothetical protein | CFA71_00450 | Not Available | Positive | 94899 - 95951 | 37474.3 |
| hypothetical protein | CFA71_00455 | Not Available | Negative | 95940 - 96488 | 20281.2 |
| methylmalonyl co-a mutase-associated gtpase meab | CFA71_00460 | Not Available | Negative | 96566 - 97537 | 34666.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
