Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | subsp. bolletii strain 1189 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
884014 bp
Thymine Count
884796 bp
Guanine Count
1583393 bp
Cytosine Count
1588284 bp
Genome Length
4940537 bp
Protein-coding Genes
4665 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit beta | CFA71_06345 | Not Available | Negative | 1251264 - 1254779 | 128800.0 |
| formate dehydrogenase | CFA71_06350 | Not Available | Negative | 1255085 - 1257265 | 79285.9 |
| abc transporter atp-binding protein | CFA71_06355 | Not Available | Negative | 1257358 - 1258506 | 41865.3 |
| mfs transporter | CFA71_06360 | Not Available | Negative | 1258636 - 1260015 | 47723.2 |
| duf4126 domain-containing protein | CFA71_06365 | Not Available | Negative | 1260096 - 1260692 | 19935.4 |
| carotenoid oxygenase | CFA71_06370 | Not Available | Negative | 1260780 - 1262291 | 54971.1 |
| tetr family transcriptional regulator | CFA71_06375 | Not Available | Positive | 1262341 - 1263093 | 26657.8 |
| 50s ribosomal protein l7/l12 | CFA71_06380 | Not Available | Negative | 1263266 - 1263655 | 13280.9 |
| 50s ribosomal protein l10 | CFA71_06385 | Not Available | Negative | 1263711 - 1264241 | 18168.9 |
| hypothetical protein | CFA71_06390 | Not Available | Positive | 1264240 - 1264443 | 7451.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
