Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | subsp. bolletii strain 1189 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
884014 bp
Thymine Count
884796 bp
Guanine Count
1583393 bp
Cytosine Count
1588284 bp
Genome Length
4940537 bp
Protein-coding Genes
4665 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit alpha | CFA71_05840 | Not Available | Negative | 1162907 - 1163959 | 38003.9 |
| 30s ribosomal protein s4 | CFA71_05845 | Not Available | Negative | 1164036 - 1164641 | 23185.9 |
| 30s ribosomal protein s11 | CFA71_05850 | Not Available | Negative | 1164669 - 1165085 | 14632.5 |
| 30s ribosomal protein s13 | CFA71_05855 | Not Available | Negative | 1165092 - 1165466 | 14215.4 |
| 50s ribosomal protein l36 | CFA71_05860 | Not Available | Negative | 1165638 - 1165751 | 4370.55 |
| translation initiation factor if-1 | CFA71_05865 | Not Available | Negative | 1165773 - 1165994 | 8489.46 |
| fad-dependent monooxygenase | CFA71_05870 | Not Available | Negative | 1166199 - 1167482 | 46162.0 |
| hypothetical protein | CFA71_05875 | Not Available | Positive | 1167621 - 1168157 | 17841.3 |
| llm class f420-dependent oxidoreductase | CFA71_05885 | Not Available | Positive | 1169740 - 1170564 | 29351.8 |
| dtdp-glucose 4,6-dehydratase | CFA71_05890 | Not Available | Positive | 1170585 - 1171580 | 36848.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
