Kingdom
Pseudomonadati
Phylum
Campylobacterota
Class
Epsilonproteobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Campylobacterota |
| Class | Epsilonproteobacteria |
| Order | Campylobacterales |
| Family | Helicobacteraceae |
| Genus | Helicobacter |
| Species | Helicobacter pylori |
| Strain | strain FDAARGOS_299 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Microaerophilic |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Aves |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
560009 bp
Thymine Count
551572 bp
Guanine Count
357569 bp
Cytosine Count
350334 bp
Genome Length
1819484 bp
Protein-coding Genes
1526 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virb2 type iv secretion protein | CEP78_003930 | Not Available | Positive | 817827 - 818129 | 11430.5 |
| virb3 type iv secretion protein | CEP78_003935 | Not Available | Positive | 818130 - 818396 | 10177.6 |
| virb4 family type iv secretion/conjugal transfer atpase | CEP78_003940 | Not Available | Positive | 818389 - 820812 | 93389.4 |
| type ia dna topoisomerase | CEP78_003945 | Not Available | Positive | 820815 - 822848 | 77681.3 |
| virb8 family protein | CEP78_003950 | Not Available | Positive | 822965 - 824065 | 42552.8 |
| transposase | CEP78_003955 | Not Available | Negative | 824034 - 825317 | 49265.6 |
| is200/is605 family transposase | CEP78_003960 | Not Available | Positive | 825387 - 825815 | 16857.7 |
| serine/threonine protein kinase | CEP78_003970 | Not Available | Negative | 827980 - 828408 | 16884.3 |
| protein kinase | CEP78_003975 | Not Available | Negative | 828451 - 829341 | 34002.8 |
| protein phosphatase | CEP78_003980 | Not Available | Negative | 829332 - 830018 | 25964.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chronic gastric inflammation | Causes | PMC10226649 |
| Gastric cancer | Causes | PMC10226649 |
| Gastric ulcers | Causes | PMC10420633 |
| Stomach carcinoma | Causes | PMC10420633 |
| Ulcers | Causes | PMC10420633 |
| Adenocarcinoma | Causes | PMC10420633 |
| Mucosa-associated lymphoid tissue lymphoma | Causes | PMC10420633 |
| Gerd | Causes | PMC10712878 |
| Gastritis | Causes | PMC10712878 |
| Gastric cancer | Causes | PMC10732068 |







