Kingdom
Pseudomonadati
Phylum
Campylobacterota
Class
Epsilonproteobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Campylobacterota |
| Class | Epsilonproteobacteria |
| Order | Campylobacterales |
| Family | Helicobacteraceae |
| Genus | Helicobacter |
| Species | Helicobacter pylori |
| Strain | strain FDAARGOS_299 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Microaerophilic |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Aves |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
560009 bp
Thymine Count
551572 bp
Guanine Count
357569 bp
Cytosine Count
350334 bp
Genome Length
1819484 bp
Protein-coding Genes
1526 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate racemase | CEP78_003365 | Not Available | Positive | 694796 - 695563 | 28414.8 |
| type iv secretion system oncogenic effector caga | CEP78_003375 | Not Available | Negative | 696665 - 700225 | 132393.0 |
| cag pathogenicity island protein | CEP78_003380 | Not Available | Positive | 700689 - 700916 | 9018.07 |
| sodium:calcium antiporter | CEP78_003385 | Not Available | Positive | 701060 - 701407 | 11997.9 |
| sodium:calcium antiporter | CEP78_003390 | Not Available | Positive | 701409 - 702032 | 24011.1 |
| cag pathogenicity island protein 23 | CEP78_003395 | Not Available | Positive | 702041 - 704992 | 112027.0 |
| type iv secretion system chaperone cagf | CEP78_003400 | Not Available | Positive | 704994 - 705800 | 31805.5 |
| sodium:calcium antiporter | CEP78_003405 | Not Available | Positive | 705855 - 706283 | 16027.3 |
| sodium:calcium antiporter | CEP78_003410 | Not Available | Positive | 706299 - 707411 | 39399.1 |
| sodium:calcium antiporter | CEP78_003415 | Not Available | Positive | 707422 - 708567 | 41571.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chronic gastric inflammation | Causes | PMC10226649 |
| Gastric cancer | Causes | PMC10226649 |
| Gastric ulcers | Causes | PMC10420633 |
| Stomach carcinoma | Causes | PMC10420633 |
| Ulcers | Causes | PMC10420633 |
| Adenocarcinoma | Causes | PMC10420633 |
| Mucosa-associated lymphoid tissue lymphoma | Causes | PMC10420633 |
| Gerd | Causes | PMC10712878 |
| Gastritis | Causes | PMC10712878 |
| Gastric cancer | Causes | PMC10732068 |







