Helicobacter pylori strain FDAARGOS_299

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain FDAARGOS_299 is a Gram-negative bacterium characterized by its microaerophilic oxygen requirement and spirilla shape. It is primarily associated with various hosts, including Homo sapiens, Gallus gallus, and other mammals and birds. This strain exhibits a free-living biotic relationship and possesses a single replicon and two membranes, which are typical features of the genus Helicobacter. H. pylori strain FDAARGOS_299 is notable for its pathogenicity in humans, being linked to a range of gastrointestinal diseases. It is implicated in chronic gastric inflammation, peptic ulcers, and various forms of gastric cancer, including gastric adenocarcinoma and mucosa-associated lymphoid tissue (MALT) lymphoma. The strain's ability to induce these health effects, such as gastritis and duodenal ulcers, underscores its significance in human health, particularly in relation to gastrointestinal disorders. The bacterium thrives optimally at 37°C, which aligns with the human body temperature, facilitating its survival and pathogenicity within the gastric environment. Its presence is often associated with an asymptomatic mucosal inflammatory response, indicating that infections can occur without immediate symptoms. Given the extensive health implications linked to H. pylori strain FDAARGOS_299, understanding its ecological role in hosts and its interaction with the gastric microbiome is crucial. This strain exemplifies the complex relationships between pathogens and their hosts, highlighting the importance of microbial research in addressing gastrointestinal diseases.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain FDAARGOS_299

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain FDAARGOS_299
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain FDAARGOS_299

Gene Summary

Adenine Count

560009 bp

Thymine Count

551572 bp

Guanine Count

357569 bp

Cytosine Count

350334 bp

Genome Length

1819484 bp

Protein-coding Genes

1526 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-methyl-2-oxobutanoate hydroxymethyltransferaseCEP78_000775Not AvailableNegative159476 - 16028829921.6
hypothetical proteinCEP78_000780Not AvailablePositive160437 - 16115927391.2
outer membrane beta-barrel proteinCEP78_000785Not AvailablePositive161149 - 16199131926.8
outer membrane beta-barrel proteinCEP78_000790Not AvailablePositive162000 - 16294435675.9
m23 family peptidaseCEP78_000795Not AvailablePositive163008 - 16427648298.0
septum site-determining protein mincCEP78_000800Not AvailablePositive164213 - 16486625054.5
udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylaseCEP78_000805Not AvailablePositive164863 - 16575032543.8
trna threonylcarbamoyladenosine biosynthesis protein tsabCEP78_000810Not AvailablePositive165823 - 16624516061.4
homoserine kinaseCEP78_000815Not AvailablePositive166299 - 16718032664.9
duf448 domain-containing proteinCEP78_000820Not AvailablePositive167152 - 16742110382.1

Displaying genes 131 – 140 of 1572 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total