Xenorhabdus sp. KJ12.1 Xekj_148

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Xenorhabdus sp. KJ12.1, identified with the accession number NJCW00000000.1, is a rod-shaped bacterium characterized by the presence of flagella. This motility feature suggests that it may have the ability to navigate its environment, which is an important trait for bacteria in various ecological contexts. The bacterium has a single replicon, indicating a simplified genetic structure that may influence its replication and evolutionary strategies. The presence of only one replicon can be advantageous for maintaining genomic stability and efficient replication under certain conditions. Xenorhabdus species are known to have symbiotic relationships, particularly with nematodes, which can influence their ecological roles in soil and plant interactions. This relationship may enhance their survival and adaptability in various environments, potentially contributing to soil health and nutrient cycling. Understanding the traits of Xenorhabdus sp. KJ12.1, such as its rod shape, flagellar motility, and genomic organization, can provide insights into its ecological functions and interactions within its habitat. These characteristics could have implications for its role in biocontrol, plant health, and the broader ecosystem dynamics where it is found.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus sp. KJ12.1
StrainXekj_148

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus sp. KJ12.1 Xekj_148, whole genome shotgun sequence.

Gene Summary

Adenine Count

1373823 bp

Thymine Count

1357032 bp

Guanine Count

1019774 bp

Cytosine Count

1045262 bp

Genome Length

4797391 bp

Protein-coding Genes

3835 genes

Non-Coding Genes

464 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iii secretion system atpaseXekj_01385Not AvailablePositive1580301 - 158156046993.0
udp-glcnac:undecaprenylphosphate glcnac-1-phosphate transferaseXekj_01386Not AvailablePositive1581913 - 158300140681.3
lipopolysaccharide biosynthesis protein wzzeXekj_01387Not AvailablePositive1583035 - 158409039714.5
udp-n-acetylglucosamine 2-epimeraseXekj_01388Not AvailablePositive1584147 - 158527742001.8
udp-n-acetyl-d-mannosaminuronate dehydrogenaseXekj_01389Not AvailablePositive1585274 - 158653645816.0
dtdp-glucose 4,6-dehydrataseXekj_01390Not AvailablePositive1586533 - 158763341478.6
bifunctional udp-n-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate n-acetyltransferaseXekj_01391Not AvailablePositive1587652 - 158852732587.2
tdp-fucosamine acetyltransferaseXekj_01392Not AvailablePositive1588511 - 158924226568.8
tdp-4-oxo-6-deoxy-d-glucose transaminaseXekj_01393Not AvailablePositive1589229 - 159039543791.6
pst family o-antigen export proteinXekj_01394Not AvailablePositive1590397 - 159164745138.4

Displaying genes 1791 – 1800 of 4299 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.