Pseudomonas nitroreducens strain DF05

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas nitroreducens strain DF05 is characterized by a single replicon, which contributes to its genomic stability and adaptability in various environments. The strain is cataloged under the accession number NJBA00000000.1, indicating it is part of a broader genomic dataset accessible for scientific scrutiny. The simplicity of having one replicon can suggest a streamlined genetic structure, potentially affording Pseudomonas nitroreducens strain DF05 a competitive advantage in nutrient-limited or stressed environments. The traits of Pseudomonas species generally include metabolic versatility, allowing them to thrive in diverse ecological niches. This versatility may be particularly beneficial in bioremediation, where such microorganisms can degrade pollutants or adapt to various substrates. In summary, Pseudomonas nitroreducens strain DF05 exemplifies the adaptability inherent in the Pseudomonas genus, facilitated by its single replicon structure. This trait underscores the potential role of strain DF05 in ecological processes, particularly in environments affected by anthropogenic pollutants, where its metabolic capabilities can be harnessed for environmental management and remediation strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas nitroreducens
Strainstrain DF05

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas nitroreducens strain DF05
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas nitroreducens strain DF05 plasmid unnamed1

Gene Summary

Adenine Count

1122833 bp

Thymine Count

1144271 bp

Guanine Count

2135585 bp

Cytosine Count

2083863 bp

Genome Length

6487527 bp

Protein-coding Genes

5800 genes

Non-Coding Genes

151 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycosyltransferaseCEG18_04225Not AvailableNegative911360 - 91179415658.3
acetolactate synthase, large subunit, biosynthetic typeCEG18_04230Not AvailablePositive912216 - 91394663168.6
acetolactate synthase small subunitCEG18_04235Not AvailablePositive913949 - 91444017747.5
ketol-acid reductoisomeraseCEG18_04240Not AvailablePositive914485 - 91550136408.6
cdp-diacylglycerol--serine o-phosphatidyltransferaseCEG18_04245Not AvailablePositive915651 - 91647529553.1
mononuclear molybdenum enzyme yedyCEG18_04250Not AvailablePositive916533 - 91754337832.1
sulfoxide reductase heme-binding subunit yedzCEG18_04255Not AvailablePositive917543 - 91815123127.4
hypothetical proteinCEG18_04265Not AvailablePositive918777 - 9188422203.97
amino acid abc transporter permeaseCEG18_04350Not AvailableNegative931917 - 93259124792.7
cystine abc transporter substrate-binding proteinCEG18_04355Not AvailableNegative932588 - 93338829272.0

Displaying genes 951 – 960 of 5951 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.