Xenorhabdus sp. KK7.4 Xekk_154

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Xenorhabdus sp. KK7.4, specifically identified by the accession number NJAH00000000.1, is a rod-shaped bacterium characterized by the presence of flagella. This morphological trait suggests that the bacterium is motile, which may enhance its ability to navigate its environment, potentially aiding in the colonization of hosts or specific habitats. The genome of Xenorhabdus sp. KK7.4 is comprised of a single replicon, which indicates a relatively straightforward genetic structure. This simplicity can be advantageous for the organism in terms of replication and gene expression, allowing it to efficiently adapt to environmental changes or stresses. In ecological terms, members of the genus Xenorhabdus are often associated with nematodes and play significant roles in soil ecosystems. They are known for their symbiotic relationships with entomopathogenic nematodes, which help in the biological control of insect pests. The motility provided by flagella may facilitate the bacterium's interaction with nematodes and contribute to its ecological function in pest management. Overall, the traits of Xenorhabdus sp. KK7.4, including its rod shape, motility through flagella, and single replicon genome, highlight its potential adaptability and ecological importance as a symbiotic organism that could play a role in agricultural pest control strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus sp. KK7.4
StrainXekk_154

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus sp. KK7.4 Xekk_154, whole genome shotgun sequence.

Gene Summary

Adenine Count

1417107 bp

Thymine Count

1415814 bp

Guanine Count

1106806 bp

Cytosine Count

1084864 bp

Genome Length

5026191 bp

Protein-coding Genes

3967 genes

Non-Coding Genes

495 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
proline--trna ligaseXekk_00461Not AvailableNegative503034 - 50475563938.5
trna -n6-methyltransferase trmoXekk_00462Not AvailableNegative504987 - 50579030439.7
membrane proteinXekk_00463Not AvailableNegative505739 - 50613114173.3
immunogenic lipoprotein aXekk_00464Not AvailableNegative506372 - 50718729601.7
abc transporter permeaseXekk_00465Not AvailableNegative507454 - 50810722905.2
amino acid abc transporter atp-binding protein peb1Xekk_00466Not AvailableNegative508100 - 50913137606.8
d,d-heptose 1,7-bisphosphate phosphataseXekk_00467Not AvailablePositive509320 - 50988921050.2
23s ribosomal rnaNot AvailableNot AvailablePositive510333 - 513237Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive513570 - 516474Not Available
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolaseXekk_00472Not AvailablePositive516876 - 51846557377.6

Displaying genes 971 – 980 of 4462 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.