Xenorhabdus sp. KK7.4 Xekk_154

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Xenorhabdus sp. KK7.4, specifically identified by the accession number NJAH00000000.1, is a rod-shaped bacterium characterized by the presence of flagella. This morphological trait suggests that the bacterium is motile, which may enhance its ability to navigate its environment, potentially aiding in the colonization of hosts or specific habitats. The genome of Xenorhabdus sp. KK7.4 is comprised of a single replicon, which indicates a relatively straightforward genetic structure. This simplicity can be advantageous for the organism in terms of replication and gene expression, allowing it to efficiently adapt to environmental changes or stresses. In ecological terms, members of the genus Xenorhabdus are often associated with nematodes and play significant roles in soil ecosystems. They are known for their symbiotic relationships with entomopathogenic nematodes, which help in the biological control of insect pests. The motility provided by flagella may facilitate the bacterium's interaction with nematodes and contribute to its ecological function in pest management. Overall, the traits of Xenorhabdus sp. KK7.4, including its rod shape, motility through flagella, and single replicon genome, highlight its potential adaptability and ecological importance as a symbiotic organism that could play a role in agricultural pest control strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus sp. KK7.4
StrainXekk_154

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus sp. KK7.4 Xekk_154, whole genome shotgun sequence.

Gene Summary

Adenine Count

1417107 bp

Thymine Count

1415814 bp

Guanine Count

1106806 bp

Cytosine Count

1084864 bp

Genome Length

5026191 bp

Protein-coding Genes

3967 genes

Non-Coding Genes

495 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna polymerase iiXekk_00420Not AvailablePositive454853 - 45720190182.9
atp-dependent helicase hepaXekk_00421Not AvailablePositive457414 - 460323110791.0
ribosomal large subunit pseudouridine synthase cXekk_00422Not AvailablePositive460451 - 46110424871.0
dna binding protein dnaj, heat shock proteinXekk_00423Not AvailableNegative461132 - 46194130444.2
lps assembly protein lptdXekk_00424Not AvailablePositive462142 - 46449389688.0
peptidyl-prolyl cis-trans isomerase suraXekk_00425Not AvailablePositive464560 - 46585848223.9
4-hydroxythreonine-4-phosphate dehydrogenaseXekk_00426Not AvailablePositive465848 - 46683735409.7
s-adenosylmethionine-6-n',n'-adenosyl dimethyltransferaseXekk_00427Not AvailablePositive466830 - 46766030826.5
co2+/mg2+ efflux protein apagXekk_00428Not AvailablePositive467695 - 46807214139.9
bis-tetraphosphataseXekk_00429Not AvailablePositive468075 - 46891131461.5

Displaying genes 931 – 940 of 4462 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.