Xenorhabdus sp. KK7.4 Xekk_154

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Xenorhabdus sp. KK7.4, specifically identified by the accession number NJAH00000000.1, is a rod-shaped bacterium characterized by the presence of flagella. This morphological trait suggests that the bacterium is motile, which may enhance its ability to navigate its environment, potentially aiding in the colonization of hosts or specific habitats. The genome of Xenorhabdus sp. KK7.4 is comprised of a single replicon, which indicates a relatively straightforward genetic structure. This simplicity can be advantageous for the organism in terms of replication and gene expression, allowing it to efficiently adapt to environmental changes or stresses. In ecological terms, members of the genus Xenorhabdus are often associated with nematodes and play significant roles in soil ecosystems. They are known for their symbiotic relationships with entomopathogenic nematodes, which help in the biological control of insect pests. The motility provided by flagella may facilitate the bacterium's interaction with nematodes and contribute to its ecological function in pest management. Overall, the traits of Xenorhabdus sp. KK7.4, including its rod shape, motility through flagella, and single replicon genome, highlight its potential adaptability and ecological importance as a symbiotic organism that could play a role in agricultural pest control strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus sp. KK7.4
StrainXekk_154

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus sp. KK7.4 Xekk_154, whole genome shotgun sequence.

Gene Summary

Adenine Count

1417107 bp

Thymine Count

1415814 bp

Guanine Count

1106806 bp

Cytosine Count

1084864 bp

Genome Length

5026191 bp

Protein-coding Genes

3967 genes

Non-Coding Genes

495 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l4Xekk_04043Not AvailableNegative4566071 - 456667622055.8
50s ribosomal protein l3Xekk_04044Not AvailableNegative4566693 - 456732522557.1
30s ribosomal protein s10Xekk_04045Not AvailableNegative4567358 - 456766911767.3
bacterioferritin bfraXekk_04046Not AvailableNegative4567968 - 456844418613.4
bacterioferritin-associated ferredoxinXekk_04047Not AvailableNegative4568521 - 45687157184.87
elongation factor tuXekk_04048Not AvailableNegative4568962 - 45690994667.92
hypothetical proteinXekk_04075Not AvailableNegative4590892 - 459118211419.4
nipsnap family containing proteinXekk_04076Not AvailableNegative4591774 - 459210912630.2
hypothetical proteinXekk_04077Not AvailablePositive4593525 - 45937378364.74
lectinXekk_04078Not AvailableNegative4593829 - 459420913371.8

Displaying genes 4101 – 4110 of 4462 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.