Xenorhabdus sp. KK7.4 Xekk_154

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Xenorhabdus sp. KK7.4, specifically identified by the accession number NJAH00000000.1, is a rod-shaped bacterium characterized by the presence of flagella. This morphological trait suggests that the bacterium is motile, which may enhance its ability to navigate its environment, potentially aiding in the colonization of hosts or specific habitats. The genome of Xenorhabdus sp. KK7.4 is comprised of a single replicon, which indicates a relatively straightforward genetic structure. This simplicity can be advantageous for the organism in terms of replication and gene expression, allowing it to efficiently adapt to environmental changes or stresses. In ecological terms, members of the genus Xenorhabdus are often associated with nematodes and play significant roles in soil ecosystems. They are known for their symbiotic relationships with entomopathogenic nematodes, which help in the biological control of insect pests. The motility provided by flagella may facilitate the bacterium's interaction with nematodes and contribute to its ecological function in pest management. Overall, the traits of Xenorhabdus sp. KK7.4, including its rod shape, motility through flagella, and single replicon genome, highlight its potential adaptability and ecological importance as a symbiotic organism that could play a role in agricultural pest control strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus sp. KK7.4
StrainXekk_154

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus sp. KK7.4 Xekk_154, whole genome shotgun sequence.

Gene Summary

Adenine Count

1417107 bp

Thymine Count

1415814 bp

Guanine Count

1106806 bp

Cytosine Count

1084864 bp

Genome Length

5026191 bp

Protein-coding Genes

3967 genes

Non-Coding Genes

495 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s16Xekk_02060Not AvailablePositive2394216 - 23944649010.9
ribosome maturation factor rimmXekk_02061Not AvailablePositive2394483 - 239503120717.5
trna -n1-methyltransferase trmdXekk_02062Not AvailablePositive2395066 - 239581827937.5
50s ribosomal protein l19Xekk_02063Not AvailablePositive2395883 - 239623613370.3
hypothetical proteinXekk_02064Not AvailablePositive2396479 - 239712624664.7
anaerobic c4-dicarboxylate transporterXekk_02065Not AvailableNegative2397205 - 239854848231.7
phospho-2-dehydro-3-deoxyheptonate aldolaseXekk_02066Not AvailablePositive2399043 - 240013740212.2
isochorismate pyruvate-lyaseXekk_02067Not AvailablePositive2400143 - 240126442222.1
prephenate dehydrataseXekk_02068Not AvailableNegative2401317 - 240247143165.1
ribosomal subunit interface proteinXekk_02070Not AvailableNegative2402970 - 240330212475.2

Displaying genes 2471 – 2480 of 4462 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.