Xenorhabdus sp. KK7.4 Xekk_154

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Xenorhabdus sp. KK7.4, specifically identified by the accession number NJAH00000000.1, is a rod-shaped bacterium characterized by the presence of flagella. This morphological trait suggests that the bacterium is motile, which may enhance its ability to navigate its environment, potentially aiding in the colonization of hosts or specific habitats. The genome of Xenorhabdus sp. KK7.4 is comprised of a single replicon, which indicates a relatively straightforward genetic structure. This simplicity can be advantageous for the organism in terms of replication and gene expression, allowing it to efficiently adapt to environmental changes or stresses. In ecological terms, members of the genus Xenorhabdus are often associated with nematodes and play significant roles in soil ecosystems. They are known for their symbiotic relationships with entomopathogenic nematodes, which help in the biological control of insect pests. The motility provided by flagella may facilitate the bacterium's interaction with nematodes and contribute to its ecological function in pest management. Overall, the traits of Xenorhabdus sp. KK7.4, including its rod shape, motility through flagella, and single replicon genome, highlight its potential adaptability and ecological importance as a symbiotic organism that could play a role in agricultural pest control strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus sp. KK7.4
StrainXekk_154

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus sp. KK7.4 Xekk_154, whole genome shotgun sequence.

Gene Summary

Adenine Count

1417107 bp

Thymine Count

1415814 bp

Guanine Count

1106806 bp

Cytosine Count

1084864 bp

Genome Length

5026191 bp

Protein-coding Genes

3967 genes

Non-Coding Genes

495 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional riboflavin kinase/fmn adenylyltransferaseXekk_01009Not AvailableNegative1183270 - 118420234671.0
30s ribosomal protein s20Xekk_01010Not AvailablePositive1184551 - 11848119583.76
lysr family transcriptional regulatorXekk_01011Not AvailableNegative1184889 - 118580935286.8
na+/h+ antiporter nhaaXekk_01012Not AvailableNegative1186017 - 118720141851.3
membrane proteinXekk_01013Not AvailablePositive1187548 - 118839330770.0
chaperone protein dnajXekk_01014Not AvailableNegative1188551 - 118975643477.7
molecular chaperone dnakXekk_01016Not AvailableNegative1189794 - 119170768895.5
succinate-acetate/proton symporter satpXekk_01017Not AvailablePositive1192057 - 119262920276.2
hypothetical proteinXekk_01018Not AvailablePositive1193233 - 119394026218.5
nifs proteinXekk_01019Not AvailablePositive1193989 - 119516742471.9

Displaying genes 1481 – 1490 of 4462 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.