Sphingopyxis sp. GW247-27LB

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis sp. GW247-27LB is a rod-shaped bacterium characterized by its single replicon, which is indicative of its genetic organization. This organism has been cataloged under the accession number NIWD00000000.1, facilitating its identification and study within microbial databases. The rod shape of Sphingopyxis sp. GW247-27LB suggests a cellular structure that may be well-suited for various environments, potentially allowing for efficient nutrient uptake and mobility. The presence of a single replicon indicates a streamlined genetic architecture that could impact its replication and evolutionary processes. Ecologically, members of the Sphingopyxis genus are often associated with various environments, including soil and aquatic systems, where they may play significant roles in the degradation of organic compounds. This particular strain could contribute to biogeochemical cycles, particularly in breaking down complex substances, thus influencing nutrient cycling and ecosystem dynamics. In summary, Sphingopyxis sp. GW247-27LB is a rod-shaped bacterium with a single replicon, cataloged under NIWD00000000.1. Its morphological and genetic traits suggest it may play an important role in environmental processes, particularly in organic matter degradation, highlighting its potential ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis sp. GW247-27LB
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis sp. GW247-27LB scaffold20.1, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4327 genes

Non-Coding Genes

166 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-glucuronate 5-epimeraseCD928_19675Not AvailableNegative4116686 - 411770238015.4
hypothetical proteinCD928_19680Not AvailableNegative4117713 - 411891842593.8
hypothetical proteinCD928_19685Not AvailableNegative4119015 - 412118678462.5
polysaccharide export proteinCD928_19690Not AvailableNegative4121206 - 412190725152.5
hypothetical proteinCD928_19695Not AvailableNegative4122013 - 412344051353.9
serine/threonine protein phosphataseCD928_19700Not AvailableNegative4123606 - 412439128888.4
udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing)CD928_19705Not AvailablePositive4124629 - 412574439862.1
udp-n-acetyl-d-mannosamine dehydrogenaseCD928_19710Not AvailablePositive4125734 - 412702946307.2
phosphoheptose isomeraseCD928_19715Not AvailablePositive4127076 - 412788228960.6
hslu--hslv peptidase proteolytic subunitCD928_19720Not AvailablePositive4127931 - 412849720290.4

Displaying genes 3871 – 3880 of 4494 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.