Sphingopyxis sp. GW247-27LB

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis sp. GW247-27LB is a rod-shaped bacterium characterized by its single replicon, which is indicative of its genetic organization. This organism has been cataloged under the accession number NIWD00000000.1, facilitating its identification and study within microbial databases. The rod shape of Sphingopyxis sp. GW247-27LB suggests a cellular structure that may be well-suited for various environments, potentially allowing for efficient nutrient uptake and mobility. The presence of a single replicon indicates a streamlined genetic architecture that could impact its replication and evolutionary processes. Ecologically, members of the Sphingopyxis genus are often associated with various environments, including soil and aquatic systems, where they may play significant roles in the degradation of organic compounds. This particular strain could contribute to biogeochemical cycles, particularly in breaking down complex substances, thus influencing nutrient cycling and ecosystem dynamics. In summary, Sphingopyxis sp. GW247-27LB is a rod-shaped bacterium with a single replicon, cataloged under NIWD00000000.1. Its morphological and genetic traits suggest it may play an important role in environmental processes, particularly in organic matter degradation, highlighting its potential ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis sp. GW247-27LB
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis sp. GW247-27LB scaffold20.1, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4327 genes

Non-Coding Genes

166 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent clp protease atp-binding subunit clpaCD928_18125Not AvailableNegative3776405 - 377874185515.6
hypothetical proteinCD928_18130Not AvailableNegative3778998 - 37791957144.43
nad(p)h-quinone oxidoreductaseCD928_18135Not AvailablePositive3779292 - 378031134965.1
hypoxanthine phosphoribosyltransferaseCD928_18140Not AvailablePositive3780359 - 378093721857.1
adenosine deaminaseCD928_18145Not AvailablePositive3780930 - 378195537119.0
rod shape-determining proteinCD928_18150Not AvailableNegative3782069 - 378310936310.3
tonb-dependent receptorCD928_18155Not AvailableNegative3783273 - 378534575759.0
hypothetical proteinCD928_18160Not AvailableNegative3785369 - 378612425922.9
hypothetical proteinCD928_18165Not AvailableNegative3786244 - 378795659323.0
transcriptional regulatorCD928_18170Not AvailableNegative3787953 - 378833013246.8

Displaying genes 3581 – 3590 of 4494 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.