Sphingopyxis sp. GW247-27LB

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis sp. GW247-27LB is a rod-shaped bacterium characterized by its single replicon, which is indicative of its genetic organization. This organism has been cataloged under the accession number NIWD00000000.1, facilitating its identification and study within microbial databases. The rod shape of Sphingopyxis sp. GW247-27LB suggests a cellular structure that may be well-suited for various environments, potentially allowing for efficient nutrient uptake and mobility. The presence of a single replicon indicates a streamlined genetic architecture that could impact its replication and evolutionary processes. Ecologically, members of the Sphingopyxis genus are often associated with various environments, including soil and aquatic systems, where they may play significant roles in the degradation of organic compounds. This particular strain could contribute to biogeochemical cycles, particularly in breaking down complex substances, thus influencing nutrient cycling and ecosystem dynamics. In summary, Sphingopyxis sp. GW247-27LB is a rod-shaped bacterium with a single replicon, cataloged under NIWD00000000.1. Its morphological and genetic traits suggest it may play an important role in environmental processes, particularly in organic matter degradation, highlighting its potential ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis sp. GW247-27LB
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis sp. GW247-27LB scaffold20.1, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4327 genes

Non-Coding Genes

166 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipoprotein transmembraneCD928_09395Not AvailableNegative1959442 - 196013124850.4
tryptophan--trna ligaseCD928_09400Not AvailableNegative1960262 - 196127836407.6
murein biosynthesis integral membrane protein murjCD928_09405Not AvailableNegative1961282 - 196289257341.2
protein-export chaperone secbCD928_09410Not AvailableNegative1963036 - 196355118643.9
preprotein translocase subunit tim44CD928_09415Not AvailablePositive1963812 - 196448024290.5
hypothetical proteinCD928_09420Not AvailablePositive1964552 - 196582644185.4
dna mismatch repair protein mutsCD928_09425Not AvailablePositive1965829 - 196640120487.0
succinyl-diaminopimelate desuccinylaseCD928_09430Not AvailableNegative1966406 - 196753939745.9
transcriptional regulatorCD928_09435Not AvailablePositive1967634 - 196810116900.8
glutathione s-transferaseCD928_09440Not AvailableNegative1968254 - 196892525069.7

Displaying genes 1911 – 1920 of 4494 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.