Hymenobacter amundsenii strain CCM 8682

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter amundsenii strain CCM 8682 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain is notable for possessing a single replicon, which is significant for its genomic organization and replication processes. The genomic data for this strain is cataloged under the accession number NIRR00000000.1, providing a reference for further research and analysis. Gram-negative bacteria like Hymenobacter amundsenii are often recognized for their complex cell wall structure, which includes an outer membrane containing lipopolysaccharides. This structural feature can influence their interactions with the environment, including resistance to certain antibiotics and their ability to inhabit diverse ecological niches. The ecological role of Hymenobacter amundsenii, while not detailed in the provided information, can be inferred to involve participation in nutrient cycling and interactions with other microbial communities, given the general characteristics of the Hymenobacter genus. Members of this genus are typically found in various environments, including soil and aquatic habitats, where they can contribute to the breakdown of organic matter and the maintenance of ecosystem health. In summary, Hymenobacter amundsenii strain CCM 8682, with its Gram-negative, rod-shaped structure and single replicon, represents a specific lineage within the diverse microbial world, highlighting the importance of such bacteria in ecological processes and environmental sustainability.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter amundsenii
Strainstrain CCM 8682

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter amundsenii strain CCM 8682


Gene Summary

Adenine Count

907357 bp

Thymine Count

909913 bp

Guanine Count

1380803 bp

Cytosine Count

1384163 bp

Genome Length

4582236 bp

Protein-coding Genes

3886 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCDA63_00200Not AvailableNegative48580 - 4924524170.5
transposaseCDA63_00205Not AvailableNegative49322 - 5068050561.2
hypothetical proteinCDA63_00210Not AvailableNegative50819 - 5292175076.2
Ncrna_class:srp_rnaNot AvailableNot AvailablePositive53464 - 53560Not Available
heat-shock protein hsp70CDA63_00215Not AvailablePositive53576 - 5543867749.9
anhydro-n-acetylmuramic acid kinaseCDA63_00220Not AvailablePositive55509 - 5670842317.7
hypothetical proteinCDA63_00225Not AvailableNegative56745 - 5714315179.5
septum formation initiatorCDA63_00230Not AvailableNegative57224 - 5753812671.4
phosphopyruvate hydrataseCDA63_00235Not AvailableNegative57761 - 5903245971.4
50s ribosomal protein l17CDA63_00240Not AvailableNegative59302 - 5990721910.0

Displaying genes 61 – 70 of 3946 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.