Hymenobacter amundsenii strain CCM 8682

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter amundsenii strain CCM 8682 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain is notable for possessing a single replicon, which is significant for its genomic organization and replication processes. The genomic data for this strain is cataloged under the accession number NIRR00000000.1, providing a reference for further research and analysis. Gram-negative bacteria like Hymenobacter amundsenii are often recognized for their complex cell wall structure, which includes an outer membrane containing lipopolysaccharides. This structural feature can influence their interactions with the environment, including resistance to certain antibiotics and their ability to inhabit diverse ecological niches. The ecological role of Hymenobacter amundsenii, while not detailed in the provided information, can be inferred to involve participation in nutrient cycling and interactions with other microbial communities, given the general characteristics of the Hymenobacter genus. Members of this genus are typically found in various environments, including soil and aquatic habitats, where they can contribute to the breakdown of organic matter and the maintenance of ecosystem health. In summary, Hymenobacter amundsenii strain CCM 8682, with its Gram-negative, rod-shaped structure and single replicon, represents a specific lineage within the diverse microbial world, highlighting the importance of such bacteria in ecological processes and environmental sustainability.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter amundsenii
Strainstrain CCM 8682

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter amundsenii strain CCM 8682

Gene Summary

Adenine Count

907357 bp

Thymine Count

909913 bp

Guanine Count

1380803 bp

Cytosine Count

1384163 bp

Genome Length

4582236 bp

Protein-coding Genes

3886 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferaseCDA63_11485Not AvailableNegative2650871 - 265196238735.3
cell division protein ftswCDA63_11490Not AvailableNegative2652066 - 265323842231.0
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseCDA63_11495Not AvailableNegative2653331 - 265468949398.8
phospho-n-acetylmuramoyl-pentapeptide- transferaseCDA63_11500Not AvailableNegative2654809 - 265602944768.8
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseCDA63_11505Not AvailableNegative2656271 - 265770151374.7
cell division proteinCDA63_11510Not AvailableNegative2657829 - 265999480000.8
16s rrna (cytosine(1402)-n(4))-methyltransferaseCDA63_11520Not AvailableNegative2660847 - 266177634375.9
division/cell wall cluster transcriptional repressor mrazCDA63_11525Not AvailableNegative2661796 - 266227218269.2
hypothetical proteinCDA63_11530Not AvailableNegative2662555 - 266313921241.9
dna-binding response regulatorCDA63_11535Not AvailablePositive2663450 - 266418427745.9

Displaying genes 2271 – 2280 of 3946 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.