Fusobacterium polymorphum strain KCOM 1248 (=ChDC F113) F113_16

Gram-negativeRodNon-motileAnaerobic

Kingdom

Fusobacteriati

Phylum

Fusobacteriota

Class

Fusobacteriia

Order

Fusobacteriales

Family

Fusobacteriaceae

Genus

Fusobacterium

Description

Fusobacterium polymorphum strain KCOM 1248 (ChDC F113) is a Gram-negative, anaerobic, non-motile rod bacterium primarily found in the gut of hosts. This strain exhibits a cell arrangement characterized by pairs, indicating a unique growth pattern. As a chemoheterotroph, F. polymorphum utilizes organic compounds as its energy source, reflecting its adaptation to the nutrient-rich environment of the gut. F. polymorphum has a single replicon, which suggests a streamlined genomic organization. It is non-sporulating, indicating that it does not form spores as a means of survival under adverse conditions. The optimal growth temperature for this strain is 37°C, placing it within the mesophilic temperature range where it thrives best. The presence of flagella in F. polymorphum is noteworthy; however, the strain is described as non-motile, suggesting that the flagella may not be functional or are not utilized for movement. The accession number associated with this strain is NIRK00000000.1, which allows for further reference and study. Biologically, the presence of F. polymorphum in the gut highlights its potential role in the complex microbial ecosystem of the gastrointestinal tract. Its anaerobic nature and chemoheterotrophic metabolism suggest that it may contribute to the breakdown of organic materials and the fermentation processes essential for gut health. Understanding the characteristics of this strain can provide insights into its ecological functions and interactions within the host gut microbiome.

Taxonomy

KingdomFusobacteriati
PhylumFusobacteriota
ClassFusobacteriia
OrderFusobacteriales
FamilyFusobacteriaceae
GenusFusobacterium
SpeciesFusobacterium polymorphum
Strainstrain KCOM 1248 (=ChDC F113) F113_16

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Fusobacterium polymorphum strain KCOM 1248 (=ChDC F113) F113_16
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature37
Temperature rangeMesophilic
HabitatHost Gut
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementPairs
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Fusobacterium polymorphum strain KCOM 1248 (=ChDC F113) F113_16,

Gene Summary

Adenine Count

926306 bp

Thymine Count

924040 bp

Guanine Count

342570 bp

Cytosine Count

339433 bp

Genome Length

2544849 bp

Protein-coding Genes

2348 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iii deoxyribonucleaseCA836_00200Not AvailableNegative40153 - 43125115635.0
dna methylaseCA836_00205Not AvailableNegative43127 - 4505874400.9
hypothetical proteinCA836_00210Not AvailablePositive45391 - 4669251518.2
threonine synthaseCA836_00215Not AvailablePositive47156 - 4861354834.1
homoserine kinaseCA836_00220Not AvailablePositive48601 - 4948533236.9
aspartate-semialdehyde dehydrogenaseCA836_00225Not AvailablePositive49487 - 5055739884.4
hypothetical proteinCA836_00230Not AvailablePositive50952 - 5128112999.6
sam-dependent methyltransferaseCA836_00235Not AvailablePositive51283 - 5203829536.3
ygiq family radical sam proteinCA836_00240Not AvailableNegative52068 - 5376864853.4
peptidase tCA836_00245Not AvailableNegative53775 - 5501346253.4

Displaying genes 71 – 80 of 2434 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.