Campylobacter hyointestinalis subsp. hyointestinalis strain VP28b

Gram-negative

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter hyointestinalis subsp. hyointestinalis strain VP28b is a Gram-negative bacterium characterized by its slender, curved rod shape. As a member of the Campylobacter genus, this strain exhibits typical features associated with this group, including a microaerophilic growth requirement, thriving in environments with reduced oxygen levels. The strain is notable for its motility, which is facilitated by a single polar flagellum, enabling efficient movement through viscous environments. This strain is part of a larger clade of Campylobacter species often associated with the gastrointestinal tracts of various animals, particularly livestock. While specific pathogenicity traits for strain VP28b are not detailed, Campylobacter species generally play significant roles in gut microbiota dynamics and can be implicated in enteric infections. Furthermore, C. hyointestinalis has been observed in association with cases of enteritis in pigs and other animals, hinting at its potential relevance in veterinary medicine. The ecological significance of Campylobacter hyointestinalis subsp. hyointestinalis strain VP28b lies in its adaptability to microaerobic conditions and its capacity to colonize the intestinal tracts of hosts. This adaptability suggests a potential role in nutrient cycling within the gut microbiome, contributing to the overall health and metabolic processes of the host organism. Further understanding of this strain's ecological interactions could provide insights into its role within complex microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter hyointestinalis
Strainsubsp. hyointestinalis strain VP28b

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Campylobacter hyointestinalis subsp. hyointestinalis strain VP28b
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter hyointestinalis subsp. hyointestinalis strain VP28b


Gene Summary

Adenine Count

556684 bp

Thymine Count

560467 bp

Guanine Count

279980 bp

Cytosine Count

303154 bp

Genome Length

1700285 bp

Protein-coding Genes

1688 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
5s ribosomal rnaNot AvailableNot Available+1236 - 1353Not Available
23s ribosomal rnaNot AvailableNot Available+1488 - 4417Not Available
molecular chaperone htpgCDQ81_00005Not Available-271 - 211870343.3
Trna-metNot AvailableNot Available+2574 - 2648Not Available
Trna-glnNot AvailableNot Available+2665 - 2739Not Available
hypothetical proteinCDQ81_00020Not Available-3489 - 410923052.2
16s ribosomal rnaNot AvailableNot Available+5147 - 6665Not Available
glutamate-5-semialdehyde dehydrogenaseCDQ81_00025Not Available-4225 - 544844767.1
cbb3-type cytochrome oxidase assembly protein ccosCDQ81_00030Not Available+5528 - 647834747.6
hypothetical proteinCDQ81_00035Not Available+6488 - 840774688.2

Displaying genes 1 – 10 of 1736 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

88 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0012554N-acetyl-beta-D-glucosaminyl-(1->4)-1,6-anhydro-N-acetyl-beta-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-diaminoheptanedioate-D-alanineC37H57N7O20Not availableNot available
Average919.893Da
Monoisotopic919.366934423Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da

Displaying 1–10 of 88 metabolites