Avrilella dinanensis strain UR159

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Avrilella

Description

Avrilella dinanensis strain UR159 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The strain is cataloged with the accession number NIPO00000000.1, which serves as a reference for its genetic material in biological databases. The presence of a single replicon often suggests a simplified reproductive strategy, which can be advantageous in environments where resources are limited or where rapid adaptation is necessary. This trait might allow Avrilella dinanensis strain UR159 to efficiently replicate and maintain its essential functions under varying ecological conditions. Understanding the genomic structure of Avrilella dinanensis strain UR159 could provide insights into its ecological role and potential applications. As a member of the microbial community, this strain may interact with other organisms in its habitat, contributing to nutrient cycling or influencing the dynamics of microbial populations. The streamlined genomic architecture may facilitate these interactions, allowing for rapid responses to environmental changes. Overall, the characteristics of Avrilella dinanensis strain UR159 underscore its potential significance in microbiological research and ecological studies, particularly in understanding how single-replicon organisms function within complex ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusAvrilella
SpeciesAvrilella dinanensis
Strainstrain UR159

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Avrilella dinanensis strain UR159 UR159_scaffold_3, whole genome

Gene Summary

Adenine Count

727964 bp

Thymine Count

728169 bp

Guanine Count

435280 bp

Cytosine Count

440368 bp

Genome Length

2331799 bp

Protein-coding Genes

2179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaCDL10_09540Not AvailableNegative1974454 - 197550340081.2
3-phosphoshikimate 1-carboxyvinyltransferaseCDL10_09545Not AvailableNegative1975698 - 197694246394.2
pyrophosphataseCDL10_09550Not AvailableNegative1977145 - 197747112526.8
hypothetical proteinCDL10_09555Not AvailableNegative1977640 - 19778377749.04
d-tyrosyl-trna(tyr) deacylaseCDL10_09560Not AvailableNegative1977837 - 197828916632.2
ribosome small subunit-dependent gtpase aCDL10_09565Not AvailableNegative1978296 - 197925536241.0
3-deoxy-7-phosphoheptulonate synthaseCDL10_09570Not AvailableNegative1979252 - 198033141141.6
tigr02757 family proteinCDL10_09575Not AvailableNegative1980420 - 198118129176.8
dtdp-rha--alpha-d-glcnac-pyrophosphate polyprenol alpha-3-l-rhamnosyltransferaseCDL10_09580Not AvailableNegative1981178 - 198217038025.7
hypothetical proteinCDL10_09585Not AvailableNegative1982172 - 198303834063.6

Displaying genes 1841 – 1850 of 2179 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.