Avrilella dinanensis strain UR159

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Avrilella

Description

Avrilella dinanensis strain UR159 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The strain is cataloged with the accession number NIPO00000000.1, which serves as a reference for its genetic material in biological databases. The presence of a single replicon often suggests a simplified reproductive strategy, which can be advantageous in environments where resources are limited or where rapid adaptation is necessary. This trait might allow Avrilella dinanensis strain UR159 to efficiently replicate and maintain its essential functions under varying ecological conditions. Understanding the genomic structure of Avrilella dinanensis strain UR159 could provide insights into its ecological role and potential applications. As a member of the microbial community, this strain may interact with other organisms in its habitat, contributing to nutrient cycling or influencing the dynamics of microbial populations. The streamlined genomic architecture may facilitate these interactions, allowing for rapid responses to environmental changes. Overall, the characteristics of Avrilella dinanensis strain UR159 underscore its potential significance in microbiological research and ecological studies, particularly in understanding how single-replicon organisms function within complex ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusAvrilella
SpeciesAvrilella dinanensis
Strainstrain UR159

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Avrilella dinanensis strain UR159 UR159_scaffold_3, whole genome

Gene Summary

Adenine Count

727964 bp

Thymine Count

728169 bp

Guanine Count

435280 bp

Cytosine Count

440368 bp

Genome Length

2331799 bp

Protein-coding Genes

2179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sco family proteinCDL10_06475Not AvailablePositive1366809 - 136747425136.8
hypothetical proteinCDL10_06480Not AvailablePositive1367474 - 136801920356.8
hypothetical proteinCDL10_06485Not AvailablePositive1368021 - 13682578843.35
transporterCDL10_06490Not AvailablePositive1368312 - 136973953429.5
efflux transporter periplasmic adaptor subunitCDL10_06495Not AvailablePositive1369741 - 137097644798.7
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsabCDL10_06500Not AvailablePositive1370988 - 137165324742.7
rna methyltransferaseCDL10_06505Not AvailablePositive1371661 - 137219419956.3
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinaseCDL10_06510Not AvailableNegative1372191 - 137329742233.5
signal peptide peptidase sppaCDL10_06515Not AvailablePositive1373381 - 137515365573.6
aminodeoxychorismate/anthranilate synthase component iiCDL10_06525Not AvailableNegative1375451 - 137602922058.6

Displaying genes 1251 – 1260 of 2179 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.