Avrilella dinanensis strain UR159

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Avrilella

Description

Avrilella dinanensis strain UR159 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The strain is cataloged with the accession number NIPO00000000.1, which serves as a reference for its genetic material in biological databases. The presence of a single replicon often suggests a simplified reproductive strategy, which can be advantageous in environments where resources are limited or where rapid adaptation is necessary. This trait might allow Avrilella dinanensis strain UR159 to efficiently replicate and maintain its essential functions under varying ecological conditions. Understanding the genomic structure of Avrilella dinanensis strain UR159 could provide insights into its ecological role and potential applications. As a member of the microbial community, this strain may interact with other organisms in its habitat, contributing to nutrient cycling or influencing the dynamics of microbial populations. The streamlined genomic architecture may facilitate these interactions, allowing for rapid responses to environmental changes. Overall, the characteristics of Avrilella dinanensis strain UR159 underscore its potential significance in microbiological research and ecological studies, particularly in understanding how single-replicon organisms function within complex ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusAvrilella
SpeciesAvrilella dinanensis
Strainstrain UR159

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Avrilella dinanensis strain UR159 UR159_scaffold_3, whole genome

Gene Summary

Adenine Count

727964 bp

Thymine Count

728169 bp

Guanine Count

435280 bp

Cytosine Count

440368 bp

Genome Length

2331799 bp

Protein-coding Genes

2179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCDL10_05205Not AvailableNegative1111238 - 111220936046.0
carbamoyl phosphate synthase large subunitCDL10_05210Not AvailableNegative1112323 - 1115175106140.0
50s ribosomal protein l34CDL10_05215Not AvailableNegative1115305 - 11154666384.96
rnd transporterCDL10_05220Not AvailableNegative1115610 - 111706455046.4
hydrophobe/amphiphile efflux-1 family rnd transporterCDL10_05225Not AvailableNegative1117054 - 1120227116361.0
efflux transporter periplasmic adaptor subunitCDL10_05230Not AvailableNegative1120233 - 112136941962.2
hypothetical proteinCDL10_05235Not AvailableNegative1121773 - 112282841132.5
hypothetical proteinCDL10_05240Not AvailablePositive1123017 - 11232719577.02
hypothetical proteinCDL10_05245Not AvailablePositive1123489 - 112385113956.8
hypothetical proteinCDL10_05250Not AvailablePositive1123862 - 112453026021.2

Displaying genes 1011 – 1020 of 2179 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.