Clostridium thermosuccinogenes strain DSM 5806

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium thermosuccinogenes strain DSM 5806 is a thermophilic, anaerobic, Gram-negative bacterium primarily found in the cecum of its host, Gallus gallus (domestic chicken). This strain is notable for its ability to thrive in high-temperature environments, characteristic of thermophiles, although specific temperature ranges are not provided. C. thermosuccinogenes DSM 5806 possesses a single replicon, which is indicative of its genetic organization and may influence its replication and adaptability within its ecological niche. The strain's habitat in the cecum suggests a role in the gut microbiome of galliforms, potentially contributing to the digestion of complex carbohydrates and the overall health of the host. The anaerobic nature of this bacterium emphasizes its adaptation to environments devoid of oxygen, aligning with its function within the gut where oxygen levels are significantly low. The presence of this strain in the cecum may have implications for microbial interactions and metabolic processes occurring in the digestive tract of chickens, contributing to nutrient absorption and fermentation processes. Understanding the specific traits of Clostridium thermosuccinogenes DSM 5806 enhances our knowledge of gut microbiota in gallus species and may inform studies on microbial health, fermentation, and potential applications in biotechnology, particularly in the context of thermophilic fermentation processes.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium thermosuccinogenes
Strainstrain DSM 5806

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangethermophilic
Habitatcecum
Biotic relationshipNot Available
Host(s)Gallus gallus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium thermosuccinogenes strain DSM 5806

Gene Summary

Adenine Count

1309789 bp

Thymine Count

1331178 bp

Guanine Count

916109 bp

Cytosine Count

958742 bp

Genome Length

4515818 bp

Protein-coding Genes

3740 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCDQ84_08190Not AvailablePositive1947466 - 194882751854.9
hypothetical proteinCDQ84_08195Not AvailableNegative1949379 - 195031735861.7
phosphoglycerate dehydrogenaseCDQ84_08200Not AvailableNegative1950685 - 195228959142.8
aminotransferaseCDQ84_08205Not AvailableNegative1952445 - 195351239807.3
diaminopimelate decarboxylaseCDQ84_08210Not AvailableNegative1953990 - 195527048052.7
permeaseCDQ84_08215Not AvailableNegative1955799 - 195617913728.6
permeaseCDQ84_08220Not AvailableNegative1956248 - 195662213152.8
hypothetical proteinCDQ84_08225Not AvailableNegative1956846 - 195819551493.9
hypothetical proteinCDQ84_08230Not AvailableNegative1958233 - 195902729990.4
type iii-a crispr-associated ramp protein csm5CDQ84_08235Not AvailableNegative1960629 - 196177443800.5

Displaying genes 1681 – 1690 of 3847 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.