Vibrio sp. T21

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. T21 is characterized by having a single replicon, which indicates a streamlined genomic structure. The genetic information for this organism can be accessed through the accession number NIGZ00000000.1. The presence of only one replicon suggests a potential adaptation to specific environmental niches or metabolic efficiencies, as organisms with fewer replicons may have reduced genetic redundancy and streamlined regulatory mechanisms. This can be advantageous in fluctuating environments where rapid adaptation is needed. Vibrio species are often associated with aquatic environments, and their ecological roles can vary widely, including participation in nutrient cycling and interactions with other microorganisms. The ability of Vibrio sp. T21 to thrive in its habitat may provide insights into its ecological interactions, such as its role in the food web and its potential contributions to the microbiome of aquatic systems. Understanding these traits can enhance our knowledge of microbial dynamics in marine environments and the potential implications for ecosystem health and stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. T21
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. T21
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. T21 NODE_99_length_214_cov_235.816, whole genome

Gene Summary

Adenine Count

1358767 bp

Thymine Count

1344565 bp

Guanine Count

1102420 bp

Cytosine Count

1145524 bp

Genome Length

4951276 bp

Protein-coding Genes

4506 genes

Non-Coding Genes

156 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribokinaseCCD93_03060Not AvailableNegative689521 - 69043832243.4
d-ribose abc transporter substrate-binding proteinCCD93_03065Not AvailableNegative690667 - 69154530678.9
ribose abc transporter permeaseCCD93_03070Not AvailableNegative691631 - 69261434318.0
ribose import atp-binding protein rbsaCCD93_03075Not AvailableNegative692611 - 69411654749.6
d-ribose pyranaseCCD93_03080Not AvailableNegative694139 - 69455815225.2
ggdef domain-containing proteinCCD93_03085Not AvailablePositive695034 - 69739789726.9
5'-methylthioadenosine/s-adenosylhomocysteine nucleosidaseCCD93_03090Not AvailableNegative697477 - 69823527246.9
hypothetical proteinCCD93_03095Not AvailableNegative698376 - 6985496395.74
peptidaseCCD93_03100Not AvailablePositive699519 - 70016023930.8
hypothetical proteinCCD93_03105Not AvailablePositive700445 - 70091518007.6

Displaying genes 651 – 660 of 4662 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.