Vibrio sp. T21

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. T21 is characterized by having a single replicon, which indicates a streamlined genomic structure. The genetic information for this organism can be accessed through the accession number NIGZ00000000.1. The presence of only one replicon suggests a potential adaptation to specific environmental niches or metabolic efficiencies, as organisms with fewer replicons may have reduced genetic redundancy and streamlined regulatory mechanisms. This can be advantageous in fluctuating environments where rapid adaptation is needed. Vibrio species are often associated with aquatic environments, and their ecological roles can vary widely, including participation in nutrient cycling and interactions with other microorganisms. The ability of Vibrio sp. T21 to thrive in its habitat may provide insights into its ecological interactions, such as its role in the food web and its potential contributions to the microbiome of aquatic systems. Understanding these traits can enhance our knowledge of microbial dynamics in marine environments and the potential implications for ecosystem health and stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. T21
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. T21
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. T21 NODE_99_length_214_cov_235.816, whole genome

Gene Summary

Adenine Count

1358767 bp

Thymine Count

1344565 bp

Guanine Count

1102420 bp

Cytosine Count

1145524 bp

Genome Length

4951276 bp

Protein-coding Genes

4506 genes

Non-Coding Genes

156 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf342 domain-containing proteinCCD93_19695Not AvailablePositive4218060 - 421973960811.8
hexapeptide transferaseCCD93_19700Not AvailableNegative4219796 - 422045524620.2
lysr family transcriptional regulatorCCD93_19705Not AvailablePositive4220544 - 422145534528.5
peptidase eCCD93_19710Not AvailablePositive4221493 - 422215824421.2
porinCCD93_19715Not AvailableNegative4222248 - 422330338734.8
pts n-acetylmuramic acid eiibc componentCCD93_19720Not AvailableNegative4223452 - 422490651203.6
n-acetylmuramic acid 6-phosphate etheraseCCD93_19725Not AvailableNegative4224935 - 422583731390.0
xre family transcriptional regulatorCCD93_19730Not AvailablePositive4226080 - 422693130814.0
murein peptide amidase aCCD93_19735Not AvailableNegative4226951 - 422766126023.0
oligopeptide abc transporter substrate-binding protein oppaCCD93_19740Not AvailablePositive4227803 - 422942860738.5

Displaying genes 3881 – 3890 of 4662 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.