Vibrio sp. T21

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. T21 is characterized by having a single replicon, which indicates a streamlined genomic structure. The genetic information for this organism can be accessed through the accession number NIGZ00000000.1. The presence of only one replicon suggests a potential adaptation to specific environmental niches or metabolic efficiencies, as organisms with fewer replicons may have reduced genetic redundancy and streamlined regulatory mechanisms. This can be advantageous in fluctuating environments where rapid adaptation is needed. Vibrio species are often associated with aquatic environments, and their ecological roles can vary widely, including participation in nutrient cycling and interactions with other microorganisms. The ability of Vibrio sp. T21 to thrive in its habitat may provide insights into its ecological interactions, such as its role in the food web and its potential contributions to the microbiome of aquatic systems. Understanding these traits can enhance our knowledge of microbial dynamics in marine environments and the potential implications for ecosystem health and stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. T21
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. T21
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. T21 NODE_99_length_214_cov_235.816, whole genome

Gene Summary

Adenine Count

1358767 bp

Thymine Count

1344565 bp

Guanine Count

1102420 bp

Cytosine Count

1145524 bp

Genome Length

4951276 bp

Protein-coding Genes

4506 genes

Non-Coding Genes

156 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l-asparaginase 1CCD93_12390Not AvailableNegative2687231 - 268824436952.4
signal peptide peptidase sppaCCD93_12395Not AvailableNegative2688409 - 269025967485.8
nadph-dependent 2,4-dienoyl-coa reductaseCCD93_12400Not AvailablePositive2690494 - 269249773380.6
nad(p)h nitroreductaseCCD93_12405Not AvailablePositive2692677 - 269322519922.3
dna topoisomerase iiiCCD93_12410Not AvailablePositive2693331 - 269529573188.2
hypothetical proteinCCD93_12415Not AvailableNegative2695346 - 26955527642.92
hypothetical proteinCCD93_12420Not AvailablePositive2695511 - 26957057607.31
short-chain dehydrogenaseCCD93_12425Not AvailableNegative2695674 - 269636324794.3
histone deacetylaseCCD93_12430Not AvailablePositive2696633 - 269754134068.9
Trna-serNot AvailableNot AvailablePositive2697710 - 2697800Not Available

Displaying genes 2471 – 2480 of 4662 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.