Pseudomonas lactis strain PpR24

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas lactis strain PpR24 is characterized by having a single replicon, indicating a streamlined genomic organization. The strain is cataloged under the accession number NIFJ00000000.1, which provides a reference for researchers seeking to access its genomic data. This unique genomic structure may contribute to its adaptability and efficiency in various environments. The presence of a single replicon suggests that P. lactis strain PpR24 may possess specific metabolic capabilities that allow it to thrive in diverse ecological niches. This adaptability is a notable feature of many Pseudomonas species, which are often capable of utilizing a wide range of substrates. Understanding the traits of Pseudomonas lactis strain PpR24 can provide insights into its role in microbial communities and its potential applications in biotechnology or environmental microbiology. Given the characteristics of Pseudomonas species, P. lactis strain PpR24 might play a role in nutrient cycling or bioremediation processes, highlighting its ecological significance in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas lactis
Strainstrain PpR24

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas lactis strain PpR24
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas lactis strain PpR24 scf_64583_119.contig_1, whole

Gene Summary

Adenine Count

1226802 bp

Thymine Count

1223375 bp

Guanine Count

1851934 bp

Cytosine Count

1850505 bp

Genome Length

6152616 bp

Protein-coding Genes

5412 genes

Non-Coding Genes

171 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lyse family translocatorCDH05_25565Not AvailablePositive5509447 - 551003420893.2
arac family transcriptional regulatorCDH05_25570Not AvailableNegative5509976 - 551085133341.4
hypothetical proteinCDH05_25575Not AvailableNegative5510918 - 5514394128333.0
microcin abc transporter atp-binding proteinCDH05_25580Not AvailableNegative5514519 - 551612059033.2
abc transporter permeaseCDH05_25585Not AvailableNegative5516122 - 551714137750.5
microcin abc transporter permeaseCDH05_25590Not AvailableNegative5517143 - 551821639271.6
abc transporter substrate-binding proteinCDH05_25595Not AvailableNegative5518217 - 552005569612.7
abc transporter substrate-binding proteinCDH05_25600Not AvailableNegative5520052 - 552188169491.7
lytic transglycosylaseCDH05_25605Not AvailableNegative5522103 - 552350352292.0
hydroxyacylglutathione hydrolaseCDH05_25610Not AvailableNegative5523602 - 552436928183.2

Displaying genes 5031 – 5040 of 5583 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.