Pseudomonas lactis strain PpR24

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas lactis strain PpR24 is characterized by having a single replicon, indicating a streamlined genomic organization. The strain is cataloged under the accession number NIFJ00000000.1, which provides a reference for researchers seeking to access its genomic data. This unique genomic structure may contribute to its adaptability and efficiency in various environments. The presence of a single replicon suggests that P. lactis strain PpR24 may possess specific metabolic capabilities that allow it to thrive in diverse ecological niches. This adaptability is a notable feature of many Pseudomonas species, which are often capable of utilizing a wide range of substrates. Understanding the traits of Pseudomonas lactis strain PpR24 can provide insights into its role in microbial communities and its potential applications in biotechnology or environmental microbiology. Given the characteristics of Pseudomonas species, P. lactis strain PpR24 might play a role in nutrient cycling or bioremediation processes, highlighting its ecological significance in various habitats.

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Gammaproteobacteria
Order	Pseudomonadales
Family	Pseudomonadaceae
Genus	Pseudomonas
Species	Pseudomonas lactis
Strain	strain PpR24

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Image source: Wikipedia/Wikimedia

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Pseudomonas lactis strain PpR24 scf_64583_119.contig_1, whole

NIFJ00000000.1

Gene Summary

Adenine Count

1226802 bp

Thymine Count

1223375 bp

Guanine Count

1851934 bp

Cytosine Count

1850505 bp

Genome Length

6152616 bp

Protein-coding Genes

5412 genes

Non-Coding Genes

171 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
udp-n-acetylmuramate--l-alanine ligase	CDH05_21630	Not Available	Negative	4626188 - 4627636	52267.0
undecaprenyldiphospho-muramoylpentapeptide beta-n- acetylglucosaminyltransferase	CDH05_21635	Not Available	Negative	4627629 - 4628699	37599.0
putative lipid ii flippase ftsw	CDH05_21640	Not Available	Negative	4628689 - 4629912	44442.7
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase	CDH05_21645	Not Available	Negative	4629909 - 4631255	47677.3
phospho-n-acetylmuramoyl-pentapeptide- transferase	CDH05_21650	Not Available	Negative	4631262 - 4632344	39283.3
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase	CDH05_21655	Not Available	Negative	4632344 - 4633714	47146.2
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase	CDH05_21660	Not Available	Negative	4633707 - 4635170	51683.8
cell division protein	CDH05_21665	Not Available	Negative	4635170 - 4636915	63455.0
cell division protein ftsl	CDH05_21670	Not Available	Negative	4636912 - 4637205	10796.3
16s rrna (cytosine(1402)-n(4))-methyltransferase	CDH05_21675	Not Available	Negative	4637202 - 4638143	34125.0