Pseudomonas lactis strain PpR24

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas lactis strain PpR24 is characterized by having a single replicon, indicating a streamlined genomic organization. The strain is cataloged under the accession number NIFJ00000000.1, which provides a reference for researchers seeking to access its genomic data. This unique genomic structure may contribute to its adaptability and efficiency in various environments. The presence of a single replicon suggests that P. lactis strain PpR24 may possess specific metabolic capabilities that allow it to thrive in diverse ecological niches. This adaptability is a notable feature of many Pseudomonas species, which are often capable of utilizing a wide range of substrates. Understanding the traits of Pseudomonas lactis strain PpR24 can provide insights into its role in microbial communities and its potential applications in biotechnology or environmental microbiology. Given the characteristics of Pseudomonas species, P. lactis strain PpR24 might play a role in nutrient cycling or bioremediation processes, highlighting its ecological significance in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas lactis
Strainstrain PpR24

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas lactis strain PpR24
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas lactis strain PpR24 scf_64583_119.contig_1, whole

Gene Summary

Adenine Count

1226802 bp

Thymine Count

1223375 bp

Guanine Count

1851934 bp

Cytosine Count

1850505 bp

Genome Length

6152616 bp

Protein-coding Genes

5412 genes

Non-Coding Genes

171 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
non-ribosomal peptide synthetaseCDH05_21115Not AvailableNegative4502079 - 4508348230095.0
luxr family transcriptional regulatorCDH05_21120Not AvailablePositive4508839 - 450963329257.5
multidrug transporterCDH05_21125Not AvailablePositive4509633 - 451105751416.7
hypothetical proteinCDH05_21130Not AvailableNegative4511054 - 451170723657.0
type iii secretion effector proteinCDH05_21135Not AvailableNegative4511945 - 451270027280.4
4-hydroxyphenylacetate catabolism regulatory protein hpaaCDH05_21140Not AvailableNegative4513286 - 451414632588.2
4-hydroxyphenylacetate isomeraseCDH05_21145Not AvailablePositive4514275 - 451494023889.6
2-hydroxyhepta-2,4-diene-1,7-dioate isomeraseCDH05_21150Not AvailablePositive4514937 - 451570728635.0
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseCDH05_21155Not AvailablePositive4515713 - 451717352776.4
3,4-dihydroxyphenylacetate 2,3-dioxygenaseCDH05_21160Not AvailablePositive4517328 - 451818531616.9

Displaying genes 4161 – 4170 of 5583 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.