Pseudomonas lactis strain PpR24

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas lactis strain PpR24 is characterized by having a single replicon, indicating a streamlined genomic organization. The strain is cataloged under the accession number NIFJ00000000.1, which provides a reference for researchers seeking to access its genomic data. This unique genomic structure may contribute to its adaptability and efficiency in various environments. The presence of a single replicon suggests that P. lactis strain PpR24 may possess specific metabolic capabilities that allow it to thrive in diverse ecological niches. This adaptability is a notable feature of many Pseudomonas species, which are often capable of utilizing a wide range of substrates. Understanding the traits of Pseudomonas lactis strain PpR24 can provide insights into its role in microbial communities and its potential applications in biotechnology or environmental microbiology. Given the characteristics of Pseudomonas species, P. lactis strain PpR24 might play a role in nutrient cycling or bioremediation processes, highlighting its ecological significance in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas lactis
Strainstrain PpR24

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas lactis strain PpR24
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas lactis strain PpR24 scf_64583_119.contig_1, whole

Gene Summary

Adenine Count

1226802 bp

Thymine Count

1223375 bp

Guanine Count

1851934 bp

Cytosine Count

1850505 bp

Genome Length

6152616 bp

Protein-coding Genes

5412 genes

Non-Coding Genes

171 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lrp/asnc family transcriptional regulatorCDH05_17455Not AvailablePositive3721882 - 372235517928.8
catechol 1,2-dioxygenaseCDH05_17460Not AvailableNegative3722462 - 372339134531.3
muconolactone delta-isomeraseCDH05_17465Not AvailableNegative3723431 - 372372111178.5
muconate cycloisomeraseCDH05_17470Not AvailableNegative3723734 - 372486140369.9
lysr family transcriptional regulatorCDH05_17475Not AvailablePositive3724976 - 372585132089.1
arac family transcriptional regulatorCDH05_17480Not AvailableNegative3725984 - 372697637491.7
anthranilate 1,2-dioxygenase large subunitCDH05_17485Not AvailablePositive3727288 - 372867952669.9
anthranilate 1,2-dioxygenase small subunitCDH05_17490Not AvailablePositive3728679 - 372917019334.8
anthranilate dioxygenase reductaseCDH05_17495Not AvailablePositive3729319 - 373032637168.2
aromatic amino acid transporter aropCDH05_17500Not AvailablePositive3730398 - 373179850681.2

Displaying genes 3441 – 3450 of 5583 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.