Pseudomonas lactis strain PpR24

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas lactis strain PpR24 is characterized by having a single replicon, indicating a streamlined genomic organization. The strain is cataloged under the accession number NIFJ00000000.1, which provides a reference for researchers seeking to access its genomic data. This unique genomic structure may contribute to its adaptability and efficiency in various environments. The presence of a single replicon suggests that P. lactis strain PpR24 may possess specific metabolic capabilities that allow it to thrive in diverse ecological niches. This adaptability is a notable feature of many Pseudomonas species, which are often capable of utilizing a wide range of substrates. Understanding the traits of Pseudomonas lactis strain PpR24 can provide insights into its role in microbial communities and its potential applications in biotechnology or environmental microbiology. Given the characteristics of Pseudomonas species, P. lactis strain PpR24 might play a role in nutrient cycling or bioremediation processes, highlighting its ecological significance in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas lactis
Strainstrain PpR24

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas lactis strain PpR24
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas lactis strain PpR24 scf_64583_119.contig_1, whole

Gene Summary

Adenine Count

1226802 bp

Thymine Count

1223375 bp

Guanine Count

1851934 bp

Cytosine Count

1850505 bp

Genome Length

6152616 bp

Protein-coding Genes

5412 genes

Non-Coding Genes

171 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hit family proteinCDH05_16245Not AvailablePositive3449207 - 344963215961.2
protein slyxCDH05_16250Not AvailablePositive3449636 - 34498427890.24
cold-shock proteinCDH05_16255Not AvailableNegative3449918 - 345052022008.1
dna starvation/stationary phase protection proteinCDH05_16260Not AvailablePositive3450948 - 345142117768.3
aryl-sulfate sulfotransferaseCDH05_16265Not AvailablePositive3451603 - 345195612874.9
fmdb family transcriptional regulatorCDH05_16270Not AvailablePositive3452119 - 34523407872.47
aspartate--trna ligaseCDH05_16275Not AvailablePositive3452449 - 345422466249.5
yebc/pmpr family dna-binding transcriptional regulatorCDH05_16280Not AvailablePositive3454360 - 345510626559.1
crossover junction endodeoxyribonuclease ruvcCDH05_16285Not AvailablePositive3455278 - 345580218349.6
holliday junction branch migration protein ruvaCDH05_16290Not AvailablePositive3455873 - 345648422247.3

Displaying genes 3201 – 3210 of 5583 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.