Pseudomonas lactis strain PpR24

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas lactis strain PpR24 is characterized by having a single replicon, indicating a streamlined genomic organization. The strain is cataloged under the accession number NIFJ00000000.1, which provides a reference for researchers seeking to access its genomic data. This unique genomic structure may contribute to its adaptability and efficiency in various environments. The presence of a single replicon suggests that P. lactis strain PpR24 may possess specific metabolic capabilities that allow it to thrive in diverse ecological niches. This adaptability is a notable feature of many Pseudomonas species, which are often capable of utilizing a wide range of substrates. Understanding the traits of Pseudomonas lactis strain PpR24 can provide insights into its role in microbial communities and its potential applications in biotechnology or environmental microbiology. Given the characteristics of Pseudomonas species, P. lactis strain PpR24 might play a role in nutrient cycling or bioremediation processes, highlighting its ecological significance in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas lactis
Strainstrain PpR24

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas lactis strain PpR24
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas lactis strain PpR24 scf_64583_119.contig_1, whole

Gene Summary

Adenine Count

1226802 bp

Thymine Count

1223375 bp

Guanine Count

1851934 bp

Cytosine Count

1850505 bp

Genome Length

6152616 bp

Protein-coding Genes

5412 genes

Non-Coding Genes

171 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
imidazole glycerol phosphate synthase cyclase subunitCDH05_09240Not AvailableNegative1925989 - 192675927129.5
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseCDH05_09245Not AvailableNegative1926769 - 192750625697.0
1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomeraseCDH05_09250Not AvailableNegative1927546 - 192780310118.1
imidazole glycerol phosphate synthase subunit hishCDH05_09255Not AvailableNegative1927804 - 192844223438.9
imidazoleglycerol-phosphate dehydrataseCDH05_09260Not AvailableNegative1928442 - 192903822000.5
mfs transporterCDH05_09265Not AvailableNegative1929319 - 193098058733.8
asma family proteinCDH05_09270Not AvailablePositive1931307 - 193352379329.6
a/g-specific adenine glycosylaseCDH05_09275Not AvailablePositive1933520 - 193458739689.0
fe(2+)-trafficking proteinCDH05_09280Not AvailablePositive1934584 - 193485610468.5
Trna-pheNot AvailableNot AvailablePositive1934960 - 1935035Not Available

Displaying genes 1871 – 1880 of 5583 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.