Pseudomonas lactis strain PpR24

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas lactis strain PpR24 is characterized by having a single replicon, indicating a streamlined genomic organization. The strain is cataloged under the accession number NIFJ00000000.1, which provides a reference for researchers seeking to access its genomic data. This unique genomic structure may contribute to its adaptability and efficiency in various environments. The presence of a single replicon suggests that P. lactis strain PpR24 may possess specific metabolic capabilities that allow it to thrive in diverse ecological niches. This adaptability is a notable feature of many Pseudomonas species, which are often capable of utilizing a wide range of substrates. Understanding the traits of Pseudomonas lactis strain PpR24 can provide insights into its role in microbial communities and its potential applications in biotechnology or environmental microbiology. Given the characteristics of Pseudomonas species, P. lactis strain PpR24 might play a role in nutrient cycling or bioremediation processes, highlighting its ecological significance in various habitats.

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Gammaproteobacteria
Order	Pseudomonadales
Family	Pseudomonadaceae
Genus	Pseudomonas
Species	Pseudomonas lactis
Strain	strain PpR24

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Image source: Wikipedia/Wikimedia

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Pseudomonas lactis strain PpR24 scf_64583_119.contig_1, whole

NIFJ00000000.1

Gene Summary

Adenine Count

1226802 bp

Thymine Count

1223375 bp

Guanine Count

1851934 bp

Cytosine Count

1850505 bp

Genome Length

6152616 bp

Protein-coding Genes

5412 genes

Non-Coding Genes

171 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
arginine--trna ligase	CDH05_08880	Not Available	Positive	1852707 - 1854443	63848.5
cell division protein	CDH05_08885	Not Available	Positive	1854445 - 1855146	24925.2
hslu--hslv peptidase proteolytic subunit	CDH05_08890	Not Available	Positive	1855367 - 1855897	18743.5
hslu--hslv peptidase atpase subunit	CDH05_08895	Not Available	Positive	1855935 - 1857272	49618.8
1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase	CDH05_08900	Not Available	Positive	1857433 - 1857810	14007.8
class ii poly(r)-hydroxyalkanoic acid synthase	CDH05_08905	Not Available	Positive	1858060 - 1859739	62218.2
poly(3-hydroxyalkanoate) depolymerase	CDH05_08910	Not Available	Positive	1859905 - 1860750	31262.5
class ii poly(r)-hydroxyalkanoic acid synthase	CDH05_08915	Not Available	Positive	1860841 - 1862523	62824.7
tetr family transcriptional regulator	CDH05_08920	Not Available	Positive	1862552 - 1863172	23425.8
poly(3-hydroxyalkanoate) granule-associated protein phaf	CDH05_08925	Not Available	Negative	1863361 - 1864296	30582.0