Fimbriiglobus ruber strain SP5

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Planctomycetia

Order

Gemmatales

Family

Gemmataceae

Genus

Fimbriiglobus

Description

Fimbriiglobus ruber strain SP5 is characterized by having a single replicon. This trait is significant as it can influence the organism's genetic stability and replication efficiency. The strain is cataloged under the accession number NIDE00000000.1, which serves as a unique identifier for its genomic sequence in biological databases. The single replicon configuration suggests that Fimbriiglobus ruber strain SP5 may exhibit streamlined genetic regulation compared to organisms with multiple replicons. This can lead to a more efficient replication process and potentially affect the organism's adaptability in various environments. In terms of ecological insights, the presence of a single replicon may contribute to the organism's ability to thrive in specific niches by reducing the complexity of gene regulation. This efficiency might be advantageous in environments where resource competition is intense, allowing Fimbriiglobus ruber strain SP5 to quickly adapt and respond to changes in its surroundings. Overall, the characteristics of Fimbriiglobus ruber strain SP5 highlight the potential evolutionary strategies that microorganisms employ to optimize survival and growth in diverse ecological contexts.

Taxonomy

KingdomPseudomonadati
PhylumPlanctomycetota
ClassPlanctomycetia
OrderGemmatales
FamilyGemmataceae
GenusFimbriiglobus
SpeciesFimbriiglobus ruber
Strainstrain SP5

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Fimbriiglobus ruber strain SP5 contig20, whole genome shotgun

Gene Summary

Adenine Count

2212218 bp

Thymine Count

2216420 bp

Guanine Count

3975337 bp

Cytosine Count

3959602 bp

Genome Length

12363577 bp

Protein-coding Genes

10462 genes

Non-Coding Genes

275 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinFRUB_02463Not AvailableNegative2956255 - 295669514561.8
type ii/iv secretion system protein tadc, associated with flp pilus assemblyFRUB_02464Not AvailableNegative2956738 - 295766732936.4
flp pilus assembly protein tadbFRUB_02465Not AvailableNegative2957678 - 295865235068.3
type ii/iv secretion system atp hydrolase tada/virb11/cpaf, tada subfamilyFRUB_02466Not AvailableNegative2958682 - 295991745464.2
type ii/iv secretion system atpase tadz/cpae, associated with flp pilus assemblyFRUB_02467Not AvailableNegative2959997 - 296136749361.5
hypothetical proteinFRUB_02468Not AvailablePositive2962568 - 29626994768.77
sensory box histidine kinase/response regulatorFRUB_02469Not AvailablePositive2962932 - 296525683182.0
sensor histidine kinaseFRUB_02470Not AvailablePositive2965360 - 296670647735.3
dna-binding response regulator, luxr familyFRUB_02471Not AvailablePositive2966703 - 296737123918.9
phage proteinFRUB_02472Not AvailablePositive2967775 - 2971443118865.0

Displaying genes 2691 – 2700 of 10737 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.