Capnocytophaga sputigena strain H6490 2

Rodanaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Capnocytophaga

Description

Capnocytophaga sputigena strain H6490 2 is a Gram-negative, anaerobic bacterium characterized by its rod shape and the presence of flagella. This strain is primarily found in the submucosal sulcus, a region of the oral cavity. It has a single replicon, indicating a streamlined genetic structure, which may play a role in its adaptability and survival in specific environments. C. sputigena is known to inhabit the mouths of humans (Homo sapiens) and other metazoans, suggesting its potential involvement in the oral microbiome. The presence of this bacterium in human hosts highlights its ecological significance, particularly in relation to oral health and disease. The anaerobic nature of C. sputigena implies that it thrives in environments devoid of oxygen, which is typical of the submucosal sulcus where oxygen levels are low. The flagella present in C. sputigena allow for motility, facilitating its movement within the oral environment and potentially influencing its interactions with other microbial species. Understanding the specific ecological roles and interactions of C. sputigena in the oral cavity could provide insights into its contributions to health and disease states. Further research may elucidate its functions within the complex oral microbiome and its impact on human health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCapnocytophaga
SpeciesCapnocytophaga sputigena
Strainstrain H6490 2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Capnocytophaga sputigena strain H6490 2
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsubmucosal sulcus
Biotic relationshipNot Available
Host(s)Homo sapiens, Metazoa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Capnocytophaga sputigena strain H6490 2


Gene Summary

Adenine Count

903820 bp

Thymine Count

915397 bp

Guanine Count

573994 bp

Cytosine Count

570737 bp

Genome Length

2963948 bp

Protein-coding Genes

2549 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
adenylosuccinate synthaseCDC50_00060Not AvailableNegative10140 - 1141147015.9
transcriptional repressorCDC50_00065Not AvailableNegative11421 - 1190018900.2
helicaseCDC50_00070Not AvailablePositive12004 - 1425987477.3
hypothetical proteinCDC50_00075Not AvailableNegative14326 - 1482918351.5
biopolymer transporter exbdCDC50_00080Not AvailableNegative14947 - 1542617991.9
biopolymer transporter exbdCDC50_00085Not AvailableNegative15441 - 1605523192.9
hypothetical proteinCDC50_00090Not AvailableNegative16062 - 1651415778.7
flagellar motor protein motaCDC50_00095Not AvailableNegative16543 - 1727426219.8
Trna-serNot AvailableNot AvailablePositive17340 - 17427Not Available
l-asparaginase 1CDC50_00105Not AvailableNegative17497 - 1852538344.4

Displaying genes 11 – 20 of 2611 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

272 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm00022412-demethylmenaquinone-8C50H70O2Chemical structure of 2-demethylmenaquinone-8Not available
Average703.0896Da
Monoisotopic702.5375815Da
BASm0002593(2E)-dodecenoyl-CoAC33H52N7O17P3SChemical structure of (2E)-dodecenoyl-CoA1066-12-2
Average943.789Da
Monoisotopic943.2353235Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da

Displaying 1–10 of 272 metabolites

Health Effects

No health effects information available for this bacterium.