Capnocytophaga sputigena strain H6490 2

Rodanaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Capnocytophaga

Description

Capnocytophaga sputigena strain H6490 2 is a Gram-negative, anaerobic bacterium that resides primarily in the submucosal sulcus of the oral cavity. This strain is part of the Capnocytophaga genus, which is characterized by its filamentous morphology and ability to thrive in environments devoid of oxygen. The anaerobic nature of C. sputigena strain H6490 2 suggests that it plays a role in the complex microbial communities found in the oral ecosystem, where oxygen levels can be minimal, particularly in subgingival areas. The submucosal habitat indicates a potential association with periodontal tissues, which may influence its interactions with other microorganisms present in the oral cavity. Research on Capnocytophaga species has highlighted their involvement in the oral microbiome, where they may contribute to the metabolic processes that shape the local environment. Given its specific habitat and anaerobic lifestyle, C. sputigena strain H6490 2 may engage in nutrient cycling within the submucosal sulcus, potentially influencing the health of the surrounding tissues. Understanding the role of this strain in the oral microbiome can provide insights into the dynamics of microbial interactions and their implications for oral health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCapnocytophaga
SpeciesCapnocytophaga sputigena
Strainstrain H6490 2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsubmucosal sulcus
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Capnocytophaga sputigena strain H6490 2


Gene Summary

Adenine Count

903820 bp

Thymine Count

915397 bp

Guanine Count

573994 bp

Cytosine Count

570737 bp

Genome Length

2963948 bp

Protein-coding Genes

2549 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinCDC50_00010Not Available+1330 - 193522564.3
ribonucleoside-diphosphate reductaseCDC50_00015Not Available+1932 - 290637486.8
peptide deformylaseCDC50_00020Not Available+2961 - 354221938.7
ribonucleoside-diphosphate reductase subunit alphaCDC50_00025Not Available+3551 - 588488074.6
hypothetical proteinCDC50_00030Not Available+5956 - 626712313.0
hypothetical proteinCDC50_00035Not Available-6654 - 68698485.1
hypothetical proteinCDC50_00040Not Available-6900 - 734917514.6
hypothetical proteinCDC50_00045Not Available-7820 - 79996550.09
integraseCDC50_00050Not Available-8223 - 945848224.0
hypothetical proteinCDC50_00055Not Available+9782 - 1008711323.3

Displaying genes 1 – 10 of 2611 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

272 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm00022412-demethylmenaquinone-8C50H70O2Chemical structure of 2-demethylmenaquinone-8Not available
Average703.0896Da
Monoisotopic702.5375815Da
BASm0002593(2E)-dodecenoyl-CoAC33H52N7O17P3SChemical structure of (2E)-dodecenoyl-CoA1066-12-2
Average943.789Da
Monoisotopic943.2353235Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da

Displaying 1–10 of 272 metabolites