Anaeromicrobium sediminis strain DY2726D Seq55

rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Peptostreptococcales

Family

Thermotaleaceae

Genus

Anaeromicrobium

Description

Anaeromicrobium sediminis strain DY2726D Seq55 is a heterotrophic bacterium characterized as Gram-negative. This species requires an anaerobic environment for growth, thriving optimally at a temperature of 37°C, which places it within the mesophilic temperature range. The organism is rod-shaped and does not form spores, indicating a reliance on specific environmental conditions for survival and reproduction. Interestingly, Anaeromicrobium sediminis has a single replicon, which suggests a streamlined genomic organization. This trait can be advantageous in stable environments, allowing for efficient replication and resource allocation. The accession number for this strain is NIBG00000000.1, which can be used for further research and reference in genomic studies. In terms of ecological insight, the anaerobic and heterotrophic nature of Anaeromicrobium sediminis suggests its potential role in the decomposition processes within sedimentary environments. By breaking down organic matter in the absence of oxygen, this bacterium could contribute to nutrient cycling and the maintenance of ecosystem health in anaerobic habitats. Its specific adaptations to mesophilic conditions also indicate that it may inhabit environments with moderate temperatures, such as freshwater sediments, where it plays a crucial part in biogeochemical processes.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderPeptostreptococcales
FamilyThermotaleaceae
GenusAnaeromicrobium
SpeciesAnaeromicrobium sediminis
Strainstrain DY2726D Seq55

Profile

Physiology
Gram staining propertiesGram-negative / gram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Anaeromicrobium sediminis strain DY2726D Seq55, whole genome

Gene Summary

Adenine Count

1640769 bp

Thymine Count

1597326 bp

Guanine Count

761279 bp

Cytosine Count

711139 bp

Genome Length

4710588 bp

Protein-coding Genes

4245 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbohydrate kinaseCCE28_09055Not AvailableNegative1921055 - 192139012198.9
sodium:proton antiporterCCE28_09060Not AvailablePositive1922301 - 192360845113.5
histidinol-phosphataseCCE28_09065Not AvailablePositive1923740 - 192450429937.3
atp phosphoribosyltransferase regulatory subunitCCE28_09070Not AvailablePositive1924629 - 192587047479.4
atp phosphoribosyltransferaseCCE28_09075Not AvailablePositive1925873 - 192652624461.9
histidinol dehydrogenaseCCE28_09080Not AvailablePositive1926562 - 192780645725.9
histidinol-phosphate transaminaseCCE28_09085Not AvailablePositive1927803 - 192884639695.8
imidazoleglycerol-phosphate dehydrataseCCE28_09090Not AvailablePositive1929169 - 192975321780.0
imidazole glycerol phosphate synthase subunit hishCCE28_09095Not AvailablePositive1929765 - 193036122441.6
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseCCE28_09100Not AvailablePositive1930358 - 193107125870.6

Displaying genes 1791 – 1800 of 4312 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.