Anaeromicrobium sediminis strain DY2726D Seq55

rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Peptostreptococcales

Family

Thermotaleaceae

Genus

Anaeromicrobium

Description

Anaeromicrobium sediminis strain DY2726D Seq55 is a heterotrophic bacterium characterized as Gram-negative. This species requires an anaerobic environment for growth, thriving optimally at a temperature of 37°C, which places it within the mesophilic temperature range. The organism is rod-shaped and does not form spores, indicating a reliance on specific environmental conditions for survival and reproduction. Interestingly, Anaeromicrobium sediminis has a single replicon, which suggests a streamlined genomic organization. This trait can be advantageous in stable environments, allowing for efficient replication and resource allocation. The accession number for this strain is NIBG00000000.1, which can be used for further research and reference in genomic studies. In terms of ecological insight, the anaerobic and heterotrophic nature of Anaeromicrobium sediminis suggests its potential role in the decomposition processes within sedimentary environments. By breaking down organic matter in the absence of oxygen, this bacterium could contribute to nutrient cycling and the maintenance of ecosystem health in anaerobic habitats. Its specific adaptations to mesophilic conditions also indicate that it may inhabit environments with moderate temperatures, such as freshwater sediments, where it plays a crucial part in biogeochemical processes.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderPeptostreptococcales
FamilyThermotaleaceae
GenusAnaeromicrobium
SpeciesAnaeromicrobium sediminis
Strainstrain DY2726D Seq55

Profile

Physiology
Gram staining propertiesGram-negative / gram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Anaeromicrobium sediminis strain DY2726D Seq55, whole genome

Gene Summary

Adenine Count

1640769 bp

Thymine Count

1597326 bp

Guanine Count

761279 bp

Cytosine Count

711139 bp

Genome Length

4710588 bp

Protein-coding Genes

4245 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribokinaseCCE28_06270Not AvailablePositive1288560 - 128947132218.9
d-ribose pyranaseCCE28_06275Not AvailablePositive1289477 - 128988715218.6
ribose abc transporter atp-binding protein rbsaCCE28_06280Not AvailablePositive1289888 - 129138456037.4
ribose abc transporter permeaseCCE28_06285Not AvailablePositive1291384 - 129232232459.9
d-ribose abc transporter substrate-binding protein rbsbCCE28_06290Not AvailablePositive1292365 - 129327331586.1
4-hydroxybutyrate dehydrogenaseCCE28_06295Not AvailablePositive1293783 - 129489841927.6
succinate-semialdehyde dehydrogenaseCCE28_06300Not AvailablePositive1294961 - 129631949003.8
rubrerythrin-2CCE28_06305Not AvailablePositive1296452 - 129700620652.4
hypothetical proteinCCE28_06310Not AvailableNegative1297451 - 129799620392.5
phosphohydrolaseCCE28_06315Not AvailablePositive1298367 - 129944640916.8

Displaying genes 1241 – 1250 of 4312 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.