Pantoea sp. VS1 192__len__253

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. VS1 192__len__253 is characterized by the presence of flagella, which suggests motility that could be advantageous for environmental adaptability and survival. This motility can facilitate the organism's ability to colonize various niches and interact with other microorganisms or host organisms. The strain has a single replicon, indicating a streamlined genomic organization that may influence its replication and genetic stability. This trait can be significant in understanding the organism's evolutionary adaptations and its potential for horizontal gene transfer, which is often observed in bacterial populations. The accession number for Pantoea sp. VS1 192__len__253 is NHZE00000000.1, which provides a reference for genomic information that can be utilized for further research and comparison with other Pantoea species or strains. In summary, the presence of flagella and a single replicon in Pantoea sp. VS1 192__len__253 highlights its potential motility and genomic characteristics, which may play crucial roles in its ecological interactions and evolutionary strategies. Understanding these traits can provide insights into the ecological functions of Pantoea species in various environments, including their roles in nutrient cycling or plant interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. VS1
Strain192__len__253

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea sp. VS1 192__len__253, whole genome shotgun sequence.

Gene Summary

Adenine Count

1156603 bp

Thymine Count

1155482 bp

Guanine Count

1549595 bp

Cytosine Count

1551151 bp

Genome Length

5412831 bp

Protein-coding Genes

4904 genes

Non-Coding Genes

128 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna polymerase sigma factor rpodCBW22_21855Not AvailablePositive4633715 - 463555970505.4
hypothetical proteinCBW22_21860Not AvailableNegative4635608 - 463648331509.4
double-stranded uracil-dna glycosylaseCBW22_21865Not AvailableNegative4636458 - 463697319288.2
tetr family transcriptional regulatorCBW22_21870Not AvailableNegative4636970 - 463755721144.6
sdr family oxidoreductaseCBW22_21875Not AvailablePositive4637695 - 463847727942.4
Trna-metNot AvailableNot AvailablePositive4638677 - 4638752Not Available
hypothetical proteinCBW22_21885Not AvailablePositive4639012 - 463965924340.8
hypothetical proteinCBW22_21890Not AvailablePositive4639649 - 46398678308.34
hypothetical proteinCBW22_21900Not AvailablePositive4641275 - 464215933693.3
atp-dependent chaperone clpbCBW22_21905Not AvailableNegative4642545 - 464511895082.2

Displaying genes 4281 – 4290 of 5032 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.