Pantoea sp. VS1 192__len__253

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. VS1 192__len__253 is characterized by the presence of flagella, which suggests motility that could be advantageous for environmental adaptability and survival. This motility can facilitate the organism's ability to colonize various niches and interact with other microorganisms or host organisms. The strain has a single replicon, indicating a streamlined genomic organization that may influence its replication and genetic stability. This trait can be significant in understanding the organism's evolutionary adaptations and its potential for horizontal gene transfer, which is often observed in bacterial populations. The accession number for Pantoea sp. VS1 192__len__253 is NHZE00000000.1, which provides a reference for genomic information that can be utilized for further research and comparison with other Pantoea species or strains. In summary, the presence of flagella and a single replicon in Pantoea sp. VS1 192__len__253 highlights its potential motility and genomic characteristics, which may play crucial roles in its ecological interactions and evolutionary strategies. Understanding these traits can provide insights into the ecological functions of Pantoea species in various environments, including their roles in nutrient cycling or plant interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. VS1
Strain192__len__253

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea sp. VS1 192__len__253, whole genome shotgun sequence.

Gene Summary

Adenine Count

1156603 bp

Thymine Count

1155482 bp

Guanine Count

1549595 bp

Cytosine Count

1551151 bp

Genome Length

5412831 bp

Protein-coding Genes

4904 genes

Non-Coding Genes

128 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-amino-4-deoxy-l-arabinose lipid a transferaseCBW22_16960Not AvailableNegative3615474 - 361712961693.9
4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylaseCBW22_16965Not AvailableNegative3617161 - 361804532346.7
bifunctional udp-glucuronic acid oxidase/udp-4-amino-4-deoxy-l-arabinose formyltransferaseCBW22_16970Not AvailableNegative3618042 - 362002173684.3
undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferaseCBW22_16975Not AvailableNegative3620018 - 362100436746.8
udp-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferaseCBW22_16980Not AvailableNegative3621006 - 362214241344.8
hypothetical proteinCBW22_16985Not AvailablePositive3622606 - 36228158104.72
prepilin peptidaseCBW22_16990Not AvailablePositive3623454 - 362421827986.6
diaminobutyrate--2-oxoglutarate transaminaseCBW22_16995Not AvailablePositive3624431 - 362581649415.0
aspartate aminotransferase family proteinCBW22_17000Not AvailablePositive3625829 - 362729553478.9
rida family proteinCBW22_17005Not AvailableNegative3627379 - 362777114366.8

Displaying genes 3321 – 3330 of 5032 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.