Pantoea sp. VS1 192__len__253

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. VS1 192__len__253 is characterized by the presence of flagella, which suggests motility that could be advantageous for environmental adaptability and survival. This motility can facilitate the organism's ability to colonize various niches and interact with other microorganisms or host organisms. The strain has a single replicon, indicating a streamlined genomic organization that may influence its replication and genetic stability. This trait can be significant in understanding the organism's evolutionary adaptations and its potential for horizontal gene transfer, which is often observed in bacterial populations. The accession number for Pantoea sp. VS1 192__len__253 is NHZE00000000.1, which provides a reference for genomic information that can be utilized for further research and comparison with other Pantoea species or strains. In summary, the presence of flagella and a single replicon in Pantoea sp. VS1 192__len__253 highlights its potential motility and genomic characteristics, which may play crucial roles in its ecological interactions and evolutionary strategies. Understanding these traits can provide insights into the ecological functions of Pantoea species in various environments, including their roles in nutrient cycling or plant interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. VS1
Strain192__len__253

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea sp. VS1 192__len__253, whole genome shotgun sequence.

Gene Summary

Adenine Count

1156603 bp

Thymine Count

1155482 bp

Guanine Count

1549595 bp

Cytosine Count

1551151 bp

Genome Length

5412831 bp

Protein-coding Genes

4904 genes

Non-Coding Genes

128 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysr family transcriptional regulatorCBW22_14280Not AvailableNegative3027030 - 302789631980.9
hypothetical proteinCBW22_14285Not AvailableNegative3027906 - 302828314575.8
hypothetical proteinCBW22_14290Not AvailablePositive3028390 - 302943636948.8
deoxyribonuclease ivCBW22_14295Not AvailablePositive3029493 - 303033831122.9
pts fructose transporter subunit iibcCBW22_14300Not AvailableNegative3030409 - 303210657236.0
1-phosphofructokinaseCBW22_14305Not AvailableNegative3032123 - 303306133646.4
bifunctional pts fructose transporter subunit iia/hpr proteinCBW22_14310Not AvailableNegative3033058 - 303418839311.5
zinc/iron-chelating domain-containing proteinCBW22_14315Not AvailableNegative3034466 - 30347208885.79
elongation factor p-like protein yeipCBW22_14320Not AvailablePositive3034873 - 303544521140.4
hypothetical proteinCBW22_14325Not AvailablePositive3035545 - 303651935876.1

Displaying genes 2801 – 2810 of 5032 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.