Escherichia coli strain 1608190062

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain 1608190062 is a Gram-negative, rod-shaped bacterium that is facultatively anaerobic and exhibits mobility due to the presence of flagella. This strain is mesophilic, with an optimal growth temperature of 37°C, and typically exists in pairs or as single cells. It possesses a dual membrane structure and has a single replicon. This strain is predominantly host-associated and has a diverse range of potential hosts, including Homo sapiens, various livestock species such as Bos taurus and Sus scrofa, as well as a variety of vertebrates and invertebrates, including Acanthamoeba and Apis mellifera. The wide range of hosts suggests that E. coli strain 1608190062 has adapted to various ecological niches, contributing to its free-living biotic relationship. In terms of health impacts, this strain is associated with a multitude of serious conditions in humans, including urinary tract infections (UTIs), gastrointestinal infections, and neonatal meningitis. It is also implicated in severe outcomes such as hemolytic uremic syndrome (HUS) and septicemia, highlighting its pathogenic potential. The diverse pathogenicity of E. coli strain 1608190062 underscores its ecological significance, as it can thrive in multiple environments and affect various hosts. This adaptability may facilitate its transmission and persistence in the environment, contributing to the ongoing challenges it poses to public health, particularly in relation to foodborne infections and hospital-acquired conditions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain 1608190062

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain 1608190062
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain 1608190062 NODE_183_length_317_cov_25,

Gene Summary

Adenine Count

1294678 bp

Thymine Count

1295793 bp

Guanine Count

1342459 bp

Cytosine Count

1321524 bp

Genome Length

5254454 bp

Protein-coding Genes

4914 genes

Non-Coding Genes

465 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein-export protein secbCCZ14_24310Not AvailablePositive4671135 - 467160217292.3
glycerol-3-phosphate dehydrogenase (nad(p)(+))CCZ14_24315Not AvailablePositive4671602 - 467262136363.8
serine acetyltransferaseCCZ14_24320Not AvailablePositive4672701 - 467352229318.4
trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trmlCCZ14_24325Not AvailableNegative4673575 - 467404817727.3
alpha-hydroxy-acid oxidizing enzymeCCZ14_24330Not AvailableNegative4674096 - 467528642716.6
transcriptional regulator lldrCCZ14_24335Not AvailableNegative4675283 - 467605929195.9
l-lactate permeaseCCZ14_24340Not AvailableNegative4676059 - 467771459219.6
adhesinCCZ14_24350Not AvailableNegative4678132 - 4682475145913.0
hypothetical proteinCCZ14_24355Not AvailableNegative4682519 - 468319925526.8
arginine:ornithine antiporterCCZ14_24360Not AvailableNegative4683342 - 46835667602.62

Displaying genes 4781 – 4790 of 5379 in total

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total