Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhamnosyltransferase | CCZ14_24085 | Not Available | Negative | 4630859 - 4631326 | 18619.6 |
| restriction endonuclease | CCZ14_24095 | Not Available | Negative | 4632178 - 4633464 | 48700.2 |
| restriction endonuclease | CCZ14_24100 | Not Available | Negative | 4633457 - 4635532 | 79503.9 |
| hypothetical protein | CCZ14_24105 | Not Available | Negative | 4635953 - 4636135 | 6988.65 |
| glycosyl transferase | CCZ14_24110 | Not Available | Negative | 4636636 - 4636890 | 9034.75 |
| hypothetical protein | CCZ14_24115 | Not Available | Negative | 4636897 - 4637064 | 6802.23 |
| s-methyl-5-thioribose kinase | CCZ14_24120 | Not Available | Positive | 4637690 - 4638949 | 47670.9 |
| s-methyl-5-thioribose-1-phosphate isomerase | CCZ14_24125 | Not Available | Positive | 4638959 - 4640074 | 40407.2 |
| fuculose phosphate aldolase | CCZ14_24130 | Not Available | Positive | 4640105 - 4640746 | 23199.2 |
| multidrug dmt transporter permease | CCZ14_24135 | Not Available | Positive | 4640850 - 4641854 | 35792.6 |
Pathways
915 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





