Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease i | CCZ14_23975 | Not Available | Positive | 4612900 - 4614327 | 54440.6 |
| is200/is605 family transposase | CCZ14_23985 | Not Available | Negative | 4614438 - 4614947 | 19864.3 |
| hypothetical protein | CCZ14_23990 | Not Available | Negative | 4614853 - 4615044 | 7166.74 |
| amino acid transporter | CCZ14_23995 | Not Available | Negative | 4615113 - 4616471 | 49554.6 |
| lysr family transcriptional regulator | CCZ14_24000 | Not Available | Negative | 4616738 - 4617667 | 34186.0 |
| nad(p)-dependent oxidoreductase | CCZ14_24005 | Not Available | Negative | 4617713 - 4618537 | 29681.7 |
| txe/yoeb family addiction module toxin | CCZ14_24010 | Not Available | Negative | 4618620 - 4618874 | 10143.1 |
| prevent-host-death family protein | CCZ14_24015 | Not Available | Negative | 4618871 - 4619122 | 9366.16 |
| his operon leader peptide | CCZ14_24020 | Not Available | Positive | 4619405 - 4619455 | 2081.43 |
| atp phosphoribosyltransferase | CCZ14_24030 | Not Available | Positive | 4619601 - 4620500 | 33368.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





