Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspd | CCZ14_22350 | Not Available | Positive | 4327127 - 4329079 | 70732.3 |
| type ii secretion system protein gspe | CCZ14_22355 | Not Available | Positive | 4329089 - 4330570 | 54680.1 |
| type ii secretion system protein gspf | CCZ14_22360 | Not Available | Positive | 4330567 - 4331763 | 44398.0 |
| type ii secretion system protein gspg | CCZ14_22365 | Not Available | Positive | 4331773 - 4332210 | 15925.1 |
| type ii secretion system protein gsph | CCZ14_22370 | Not Available | Positive | 4332218 - 4332727 | 18485.0 |
| type ii secretion system protein gspi | CCZ14_22375 | Not Available | Positive | 4332724 - 4333101 | 13946.3 |
| type ii secretion system protein j | CCZ14_22380 | Not Available | Positive | 4333094 - 4333681 | 22246.6 |
| type ii secretion system protein k | CCZ14_22385 | Not Available | Positive | 4333674 - 4334657 | 37468.5 |
| type ii secretion system protein gspl | CCZ14_22390 | Not Available | Positive | 4334672 - 4335835 | 44476.1 |
| type ii secretion system protein m | CCZ14_22395 | Not Available | Positive | 4335832 - 4336293 | 17313.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





