Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor flia | CCZ14_22045 | Not Available | Positive | 4289406 - 4290125 | 27549.8 |
| flagellar regulatory protein fliz | CCZ14_22050 | Not Available | Positive | 4290171 - 4290722 | 21527.9 |
| cystine-binding periplasmic protein | CCZ14_22055 | Not Available | Positive | 4290810 - 4291610 | 29040.8 |
| aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydrase family protein | CCZ14_22060 | Not Available | Positive | 4291715 - 4292701 | 35188.5 |
| amino acid abc transporter permease | CCZ14_22065 | Not Available | Positive | 4292716 - 4293384 | 24802.7 |
| l-cystine abc transporter atp-binding protein yecc | CCZ14_22070 | Not Available | Positive | 4293381 - 4294133 | 27705.8 |
| transcriptional regulator sdia | CCZ14_22075 | Not Available | Positive | 4294363 - 4295085 | 28036.8 |
| hypothetical protein | CCZ14_22080 | Not Available | Negative | 4295153 - 4295377 | 8239.04 |
| dna-binding response regulator | CCZ14_22085 | Not Available | Positive | 4295836 - 4296492 | 23864.1 |
| excinuclease abc subunit c | CCZ14_22090 | Not Available | Positive | 4296489 - 4298321 | 68192.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





